############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS2 FINGERPRINT = 140 LOOP_LENGTH_SUM = 3 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 354 S1_NAME_ID3 = 361 S1_NUM_ID5_ORIG = 354 S1_NUM_ID3_ORIG = 361 S1_NAME2_ID5 = 356 S1_NAME2_ID3 = 359 S1_NUM2_ID5_ORIG = 356 S1_NUM2_ID3_ORIG = 359 S1_SQ2 = CAGU S1_SQLEN2 = 4 S1_SQ = ACCAGUAC S1_SQLEN = 8 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 291 S2_NAME_ID3 = 297 S2_NUM_ID5_ORIG = 291 S2_NUM_ID3_ORIG = 297 S2_NAME2_ID5 = 293 S2_NAME2_ID3 = 295 S2_NUM2_ID5_ORIG = 293 S2_NUM2_ID3_ORIG = 295 S2_SQ2 = ACC S2_SQLEN2 = 3 S2_SQ = CGACCGU S2_SQLEN = 7 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 356 H1_OUTID2_ORIG = 295 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 40.04523835755673 H1_P_Y = 129.44958482249828 H1_P_Z = 14.68290772380638 # Orientation: H1_DX_X = 0.10957253311143234 H1_DX_Y = -0.796847787645703 H1_DX_Z = 0.5941611425460973 H1_DY_X = 0.619629587570607 H1_DY_Y = 0.5221576707600661 H1_DY_Z = 0.5860124069279582 H1_DZ_X = -0.7772084882415058 H1_DZ_Y = 0.30394895984451864 H1_DZ_Z = 0.5509646046841876 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 293 H2_OUTID2_ORIG = 359 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 60.92399979305032 H2_P_Y = 120.1348456354974 H2_P_Z = 1.432868516836093 # Orientation: H2_DX_X = -0.9430799260168357 H2_DX_Y = -0.33241590156892187 H2_DX_Z = 0.009996075640508195 H2_DY_X = -0.2211760897789219 H2_DY_Y = 0.6044737234693542 H2_DY_Z = -0.7653055957885031 H2_DZ_X = 0.24835738453727174 H2_DZ_Y = -0.7239552375797871 H2_DZ_Z = -0.6435894836979532 ############# END of Description of junction: j4