#############  Start of Description of junction: j9
# Number of strands:
NUM_STRANDS = 3
LILLEY = HS1HS4HS5
FINGERPRINT = 57:123:172
LOOP_LENGTH_SUM = 10
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  321
S1_NAME_ID3 = 325
S1_NUM_ID5_ORIG =  321
S1_NUM_ID3_ORIG = 325
S1_NAME2_ID5 =  322
S1_NAME2_ID3 = 324
S1_NUM2_ID5_ORIG =  322
S1_NUM2_ID3_ORIG = 324
S1_SQ2 = GCG
S1_SQLEN2 = 3
S1_SQ = AGCGU
S1_SQLEN = 5
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  303
S2_NAME_ID3 = 310
S2_NUM_ID5_ORIG =  303
S2_NUM_ID3_ORIG = 310
S2_NAME2_ID5 =  304
S2_NAME2_ID3 = 309
S2_NUM2_ID5_ORIG =  304
S2_NUM2_ID3_ORIG = 309
S2_SQ2 = GAAGUC
S2_SQLEN2 = 6
S2_SQ = CGAAGUCU
S2_SQLEN = 8
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  340
S3_NAME_ID3 = 348
S3_NUM_ID5_ORIG =  340
S3_NUM_ID3_ORIG = 348
S3_NAME2_ID5 =  341
S3_NAME2_ID3 = 347
S3_NUM2_ID5_ORIG =  341
S3_NUM2_ID3_ORIG = 347
S3_SQ2 = CCCCGUA
S3_SQLEN2 = 7
S3_SQ = ACCCCGUAC
S3_SQLEN = 9
S3_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 8
H1_INID2 = 2
H1_OUTID2 = 7
H1_INID2_ORIG = 322
H1_OUTID2_ORIG = 309
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 4.052776051810344
H1_P_Y = 140.92012141785486
H1_P_Z = 39.80003918054649
# Orientation:
H1_DX_X = -0.7595281867134869
H1_DX_Y = 0.4767025163176868
H1_DX_Z = -0.4425738859491233
H1_DY_X = -0.6404251095016305
H1_DY_Y = -0.42888870192876993
H1_DY_Z = 0.6371107913680945
H1_DZ_X = 0.11389737796603416
H1_DZ_Y = 0.7673390334749399
H1_DZ_Z = 0.6310453192903154
## Properties of helix 2
H2_INID = 1
H2_OUTID = 5
H2_INID2 = 2
H2_OUTID2 = 4
H2_INID2_ORIG = 341
H2_OUTID2_ORIG = 324
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 5.729213702873547
H2_P_Y = 128.60751752958805
H2_P_Z = 32.28354032513616
# Orientation:
H2_DX_X = -0.21801545485198304
H2_DX_Y = 0.5202859325483189
H2_DX_Z = -0.8256947437388682
H2_DY_X = 0.9729495049549177
H2_DY_Y = 0.049629430021383314
H2_DY_Z = -0.22562398029405983
H2_DZ_X = -0.07641022348914639
H2_DZ_Y = -0.8525488068539175
H2_DZ_Z = -0.5170319232680711
## Properties of helix 3
H3_INID = 1
H3_OUTID = 9
H3_INID2 = 2
H3_OUTID2 = 8
H3_INID2_ORIG = 304
H3_OUTID2_ORIG = 347
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 30.79035084488525
H3_P_Y = 133.7582315770212
H3_P_Z = 21.557493708022434
# Orientation:
H3_DX_X = -0.6121112647438558
H3_DX_Y = -0.7117994530753151
H3_DX_Z = -0.3444725506848805
H3_DY_X = -0.27067427976687597
H3_DY_Y = 0.5978980029618128
H3_DY_Z = -0.7544888417511295
H3_DZ_X = 0.7430041950395356
H3_DZ_Y = -0.3685912596033347
H3_DZ_Z = -0.558645907080404
#############  END of Description of junction: j9