############# Start of Description of junction: j40 # Number of strands: NUM_STRANDS = 3 LILLEY = 2HS2HS2 FINGERPRINT = 72:103:156 LOOP_LENGTH_SUM = 4 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2239 S1_NAME_ID3 = 2246 S1_NUM_ID5_ORIG = 2239 S1_NUM_ID3_ORIG = 2246 S1_NAME2_ID5 = 2241 S1_NAME2_ID3 = 2244 S1_NUM2_ID5_ORIG = 2241 S1_NUM2_ID3_ORIG = 2244 S1_SQ2 = CUCA S1_SQLEN2 = 4 S1_SQ = CUCUCACU S1_SQLEN = 8 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 2131 S2_NAME_ID3 = 2136 S2_NUM_ID5_ORIG = 2131 S2_NUM_ID3_ORIG = 2136 S2_NAME2_ID5 = 2133 S2_NAME2_ID3 = 2134 S2_NUM2_ID5_ORIG = 2133 S2_NUM2_ID3_ORIG = 2134 S2_SQ2 = UG S2_SQLEN2 = 2 S2_SQ = GCUGAG S2_SQLEN = 6 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 2255 S3_NAME_ID3 = 2262 S3_NUM_ID5_ORIG = 2255 S3_NUM_ID3_ORIG = 2262 S3_NAME2_ID5 = 2257 S3_NAME2_ID3 = 2260 S3_NUM2_ID5_ORIG = 2257 S3_NUM2_ID3_ORIG = 2260 S3_SQ2 = GACA S3_SQLEN2 = 4 S3_SQ = AGGACACC S3_SQLEN = 8 S3_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 2241 H1_OUTID2_ORIG = 2134 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 122.76777349743799 H1_P_Y = 100.22789141240028 H1_P_Z = 36.33416750510557 # Orientation: H1_DX_X = 0.5231864091922631 H1_DX_Y = 0.28553794483639194 H1_DX_Z = -0.8029595651682016 H1_DY_X = 0.8492935897883882 H1_DY_Y = -0.09670161580984882 H1_DY_Z = 0.5189886278562525 H1_DZ_X = 0.0705434588097944 H1_DZ_Y = -0.9534762081763688 H1_DZ_Z = -0.29309851732953973 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 2257 H2_OUTID2_ORIG = 2244 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 120.83720117086601 H2_P_Y = 124.2718637524484 H2_P_Z = 34.54319746343951 # Orientation: H2_DX_X = -0.7275888938463737 H2_DX_Y = -0.35063269090269955 H2_DX_Z = 0.5896364283367674 H2_DY_X = 0.5575042937860673 H2_DY_Y = 0.1986362497760581 H2_DY_Z = 0.8060599249962834 H2_DZ_X = -0.3997541293864373 H2_DZ_Y = 0.9152050897723569 H2_DZ_Z = 0.05095370146766243 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 2133 H3_OUTID2_ORIG = 2260 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 110.21732217962241 H3_P_Y = 105.39891178407493 H3_P_Z = 45.67650130761904 # Orientation: H3_DX_X = -0.36533763829352495 H3_DX_Y = 0.8514053359929505 H3_DX_Z = -0.37634739787705485 H3_DY_X = -0.5681657171873127 H3_DY_Y = -0.5242019402426621 H3_DY_Z = -0.6343500954984265 H3_DZ_X = -0.7373710923674395 H3_DZ_Y = -0.01792427651427886 H3_DZ_Z = 0.6752500221786661 ############# END of Description of junction: j40