############# Start of Description of junction: j53 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS2HS2HS3 FINGERPRINT = 13:25:151:154:168:176 LOOP_LENGTH_SUM = 7 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1843 S1_NAME_ID3 = 1848 S1_NUM_ID5_ORIG = 1843 S1_NUM_ID3_ORIG = 1848 S1_NAME2_ID5 = 1844 S1_NAME2_ID3 = 1847 S1_NUM2_ID5_ORIG = 1844 S1_NUM2_ID3_ORIG = 1847 S1_SQ2 = CAUA S1_SQLEN2 = 4 S1_SQ = ACAUAG S1_SQLEN = 6 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 1827 S2_NAME_ID3 = 1833 S2_NUM_ID5_ORIG = 1827 S2_NUM_ID3_ORIG = 1833 S2_NAME2_ID5 = 1828 S2_NAME2_ID3 = 1832 S2_NUM2_ID5_ORIG = 1828 S2_NUM2_ID3_ORIG = 1832 S2_SQ2 = GACUG S2_SQLEN2 = 5 S2_SQ = GGACUGU S2_SQLEN = 7 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 1883 S3_NAME_ID3 = 1886 S3_NUM_ID5_ORIG = 1883 S3_NUM_ID3_ORIG = 1886 S3_NAME2_ID5 = 1884 S3_NAME2_ID3 = 1885 S3_NUM2_ID5_ORIG = 1884 S3_NUM2_ID3_ORIG = 1885 S3_SQ2 = GA S3_SQLEN2 = 2 S3_SQ = UGAA S3_SQLEN = 4 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 2016 S4_NAME_ID3 = 2021 S4_NUM_ID5_ORIG = 2016 S4_NUM_ID3_ORIG = 2021 S4_NAME2_ID5 = 2017 S4_NAME2_ID3 = 2020 S4_NUM2_ID5_ORIG = 2017 S4_NUM2_ID3_ORIG = 2020 S4_SQ2 = UAAC S4_SQLEN2 = 4 S4_SQ = UUAACC S4_SQLEN = 6 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 2 H1_OUTID2 = 6 H1_INID2_ORIG = 1844 H1_OUTID2_ORIG = 1832 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 97.22115611752588 H1_P_Y = 140.4415482431812 H1_P_Z = 92.2849352869138 # Orientation: H1_DX_X = -0.04405771940702152 H1_DX_Y = 0.22649932363935932 H1_DX_Z = -0.9730143748946034 H1_DY_X = -0.4180521163392399 H1_DY_Y = -0.8887654469658912 H1_DY_Z = -0.1879585281485987 H1_DZ_X = -0.9073540353053602 H1_DZ_Y = 0.3984896945598564 H1_DZ_Z = 0.1338455002779284 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 2 H2_OUTID2 = 5 H2_INID2_ORIG = 1884 H2_OUTID2_ORIG = 1847 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 110.73155117869484 H2_P_Y = 130.9524435994205 H2_P_Z = 78.58665565763847 # Orientation: H2_DX_X = 0.6600989183524177 H2_DX_Y = 0.5617963947177316 H2_DX_Z = 0.49865241288111406 H2_DY_X = 0.1699976342630265 H2_DY_Y = -0.7583276432201842 H2_DY_Z = 0.6293170821399343 H2_DZ_X = 0.731689976926674 H2_DZ_Y = -0.3306417947119087 H2_DZ_Z = -0.5960753150858835 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 4 H3_INID2 = 2 H3_OUTID2 = 3 H3_INID2_ORIG = 2017 H3_OUTID2_ORIG = 1885 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 113.4803212116558 H3_P_Y = 130.077869002552 H3_P_Z = 93.90539387969899 # Orientation: H3_DX_X = 0.5214425571711132 H3_DX_Y = 0.8354948934274944 H3_DX_Z = -0.17333765496117337 H3_DY_X = 0.5092928621398869 H3_DY_Y = -0.14174975497763853 H3_DY_Z = 0.8488390822394649 H3_DZ_X = 0.6846301484335982 H3_DZ_Y = -0.5309004520815392 H3_DZ_Z = -0.4994259402908767 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 2 H4_OUTID2 = 5 H4_INID2_ORIG = 1828 H4_OUTID2_ORIG = 2020 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 104.37840619811841 H4_P_Y = 140.43230604324577 H4_P_Z = 104.52614832340852 # Orientation: H4_DX_X = -0.35385444558018264 H4_DX_Y = 0.4856128656233807 H4_DX_Z = -0.799354224411303 H4_DY_X = -0.5362674300850188 H4_DY_Y = -0.8055553622778007 H4_DY_Z = -0.2519877015560752 H4_DZ_X = -0.7662925516884229 H4_DZ_Y = 0.33950066722550787 H4_DZ_Z = 0.5454677095670064 ############# END of Description of junction: j53