#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = HS6HS12HS12HS16
FINGERPRINT = 9:74:77:80:87:138
LOOP_LENGTH_SUM = 46
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  446
S1_NAME_ID3 = 467
S1_NUM_ID5_ORIG =  446
S1_NUM_ID3_ORIG = 467
S1_NAME2_ID5 =  448
S1_NAME2_ID3 = 465
S1_NUM2_ID5_ORIG =  448
S1_NUM2_ID3_ORIG = 465
S1_SQ2 = GACCGAUAGUGAACAAGU
S1_SQLEN2 = 18
S1_SQ = GAGACCGAUAGUGAACAAGUAG
S1_SQLEN = 22
S1_CHAR = 0
## Properties of strand 2
S2_NAME_ID5 =  25
S2_NAME_ID3 = 36
S2_NUM_ID5_ORIG =  25
S2_NUM_ID3_ORIG = 36
S2_NAME2_ID5 =  27
S2_NAME2_ID3 = 34
S2_NUM2_ID5_ORIG =  27
S2_NUM2_ID3_ORIG = 34
S2_SQ2 = UGCUCGGC
S2_SQLEN2 = 8
S2_SQ = AUUGCUCGGCUC
S2_SQLEN = 12
S2_CHAR = 0
## Properties of strand 3
S3_NAME_ID5 =  474
S3_NAME_ID3 = 491
S3_NUM_ID5_ORIG =  474
S3_NUM_ID3_ORIG = 491
S3_NAME2_ID5 =  476
S3_NAME2_ID3 = 489
S3_NUM2_ID5_ORIG =  476
S3_NUM2_ID3_ORIG = 489
S3_SQ2 = AACGCUGCAAAGUA
S3_SQLEN2 = 14
S3_SQ = CGAACGCUGCAAAGUACC
S3_SQLEN = 18
S3_CHAR = 0
## Properties of strand 4
S4_NAME_ID5 =  501
S4_NAME_ID3 = 518
S4_NUM_ID5_ORIG =  501
S4_NUM_ID3_ORIG = 518
S4_NAME2_ID5 =  503
S4_NAME2_ID3 = 516
S4_NUM2_ID5_ORIG =  503
S4_NUM2_ID3_ORIG = 516
S4_SQ2 = GGCGAAAUAGAGCA
S4_SQLEN2 = 14
S4_SQ = GAGGCGAAAUAGAGCAUG
S4_SQLEN = 18
S4_CHAR = 0
## Properties of helix 1
H1_INID = 1
H1_OUTID = 12
H1_INID2 = 3
H1_OUTID2 = 10
H1_INID2_ORIG = 448
H1_OUTID2_ORIG = 34
H1_INSEQ_CHAR = 0
H1_OUTSEQ_CHAR = 0
# Position:
H1_P_X = 45.65983565302872
H1_P_Y = 127.26888070033661
H1_P_Z = 37.31077710381326
# Orientation:
H1_DX_X = -0.19355807874141817
H1_DX_Y = -0.9317548657440966
H1_DX_Z = 0.3071939783201145
H1_DY_X = -0.5897608262738174
H1_DY_Y = -0.13972425939994082
H1_DY_Z = -0.7953988302279456
H1_DZ_X = 0.7840391813849266
H1_DZ_Y = -0.33512684389251035
H1_DZ_Z = -0.5224677603028738
## Properties of helix 2
H2_INID = 1
H2_OUTID = 22
H2_INID2 = 3
H2_OUTID2 = 20
H2_INID2_ORIG = 476
H2_OUTID2_ORIG = 465
H2_INSEQ_CHAR = 0
H2_OUTSEQ_CHAR = 0
# Position:
H2_P_X = 63.65572493724716
H2_P_Y = 144.42472852814646
H2_P_Z = 56.27015721825814
# Orientation:
H2_DX_X = -0.6521806213118779
H2_DX_Y = 0.40263238406703294
H2_DX_Z = 0.6422986847921806
H2_DY_X = 0.24749432168986374
H2_DY_Y = -0.6877683942901456
H2_DY_Z = 0.6824376869332696
H2_DZ_X = 0.716524247961317
H2_DZ_Y = 0.6040379119856993
H2_DZ_Z = 0.34889998992177595
## Properties of helix 3
H3_INID = 1
H3_OUTID = 18
H3_INID2 = 3
H3_OUTID2 = 16
H3_INID2_ORIG = 503
H3_OUTID2_ORIG = 489
H3_INSEQ_CHAR = 0
H3_OUTSEQ_CHAR = 0
# Position:
H3_P_X = 25.676038592594587
H3_P_Y = 171.65009093767293
H3_P_Z = 66.19556163651542
# Orientation:
H3_DX_X = -0.7174388054832086
H3_DX_Y = 0.6835417031512634
H3_DX_Z = -0.13435884950347088
H3_DY_X = -0.3408119828530154
H3_DY_Y = -0.17619246470570715
H3_DY_Z = 0.9234735555091476
H3_DZ_X = 0.607559670098837
H3_DZ_Y = 0.7083268704729448
H3_DZ_Z = 0.35936651462731106
## Properties of helix 4
H4_INID = 1
H4_OUTID = 18
H4_INID2 = 3
H4_OUTID2 = 16
H4_INID2_ORIG = 27
H4_OUTID2_ORIG = 516
H4_INSEQ_CHAR = 0
H4_OUTSEQ_CHAR = 0
# Position:
H4_P_X = 27.827951895891005
H4_P_Y = 142.005722397384
H4_P_Z = 69.32224966766145
# Orientation:
H4_DX_X = -0.7570518327522215
H4_DX_Y = -0.6435582826806581
H4_DX_Z = -0.1127176087380235
H4_DY_X = 0.6018262010647675
H4_DY_Y = -0.7540425925152192
H4_DY_Z = 0.26310642786691574
H4_DZ_X = -0.25431819879521456
H4_DZ_Y = 0.1313487931656141
H4_DZ_Z = 0.9581595630663458
#############  END of Description of junction: j1