############# Start of Description of junction: j11 # Number of strands: NUM_STRANDS = 7 LILLEY = 2HS2HS3HS3HS2HS2HS6 FINGERPRINT = 28:41:41:42:60:64:65:76:92:101:102:106:118:124:131:132:134:143:143:157:166 LOOP_LENGTH_SUM = 18 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 926 S1_NAME_ID3 = 931 S1_NUM_ID5_ORIG = 926 S1_NUM_ID3_ORIG = 931 S1_NAME2_ID5 = 928 S1_NAME2_ID3 = 929 S1_NUM2_ID5_ORIG = 928 S1_NUM2_ID3_ORIG = 929 S1_SQ2 = GA S1_SQLEN2 = 2 S1_SQ = AUGACC S1_SQLEN = 6 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 910 S2_NAME_ID3 = 917 S2_NUM_ID5_ORIG = 910 S2_NUM_ID3_ORIG = 917 S2_NAME2_ID5 = 912 S2_NAME2_ID3 = 915 S2_NUM2_ID5_ORIG = 912 S2_NUM2_ID3_ORIG = 915 S2_SQ2 = AAAC S2_SQLEN2 = 4 S2_SQ = CGAAACAU S2_SQLEN = 8 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 1039 S3_NAME_ID3 = 1047 S3_NUM_ID5_ORIG = 1039 S3_NUM_ID3_ORIG = 1047 S3_NAME2_ID5 = 1041 S3_NAME2_ID3 = 1045 S3_NUM2_ID5_ORIG = 1041 S3_NUM2_ID3_ORIG = 1045 S3_SQ2 = UUCCG S3_SQLEN2 = 5 S3_SQ = GAUUCCGGU S3_SQLEN = 9 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 1067 S4_NAME_ID3 = 1075 S4_NUM_ID5_ORIG = 1067 S4_NUM_ID3_ORIG = 1075 S4_NAME2_ID5 = 1069 S4_NAME2_ID3 = 1073 S4_NUM2_ID5_ORIG = 1069 S4_NUM2_ID3_ORIG = 1073 S4_SQ2 = CAGGA S4_SQLEN2 = 5 S4_SQ = ACCAGGAGG S4_SQLEN = 9 S4_CHAR = 0 ## Properties of strand 5 S5_NAME_ID5 = 1084 S5_NAME_ID3 = 1091 S5_NUM_ID5_ORIG = 1084 S5_NUM_ID3_ORIG = 1091 S5_NAME2_ID5 = 1086 S5_NAME2_ID3 = 1089 S5_NUM2_ID5_ORIG = 1086 S5_NUM2_ID3_ORIG = 1089 S5_SQ2 = AGAG S5_SQLEN2 = 4 S5_SQ = CCAGAGAU S5_SQLEN = 8 S5_CHAR = 0 ## Properties of strand 6 S6_NAME_ID5 = 1265 S6_NAME_ID3 = 1272 S6_NUM_ID5_ORIG = 1265 S6_NUM_ID3_ORIG = 1272 S6_NAME2_ID5 = 1267 S6_NAME2_ID3 = 1270 S6_NUM2_ID5_ORIG = 1267 S6_NUM2_ID3_ORIG = 1270 S6_SQ2 = CCGU S6_SQLEN2 = 4 S6_SQ = GUCCGUAC S6_SQLEN = 8 S6_CHAR = 0 ## Properties of strand 7 S7_NAME_ID5 = 1284 S7_NAME_ID3 = 1295 S7_NUM_ID5_ORIG = 1284 S7_NUM_ID3_ORIG = 1295 S7_NAME2_ID5 = 1286 S7_NAME2_ID3 = 1293 S7_NUM2_ID5_ORIG = 1286 S7_NUM2_ID3_ORIG = 1293 S7_SQ2 = AAUCGAGU S7_SQLEN2 = 8 S7_SQ = GUAAUCGAGUAG S7_SQLEN = 12 S7_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 928 H1_OUTID2_ORIG = 915 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 57.98404653738809 H1_P_Y = 91.96323788437557 H1_P_Z = 81.1127329060782 # Orientation: H1_DX_X = 0.13720200140054573 H1_DX_Y = -0.9866009716445916 H1_DX_Z = 0.08828439024895829 H1_DY_X = 0.23243418343683686 H1_DY_Y = -0.05457197668107483 H1_DY_Z = -0.9710799399283019 H1_DZ_X = 0.9628862659638102 H1_DZ_Y = 0.15375442143582063 H1_DZ_Z = 0.22183240680116967 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 1041 H2_OUTID2_ORIG = 929 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 40.89427648085974 H2_P_Y = 83.96928811909204 H2_P_Z = 71.02274705226294 # Orientation: H2_DX_X = -0.42144572646384404 H2_DX_Y = 0.4392619663719728 H2_DX_Z = 0.7933677738252243 H2_DY_X = -0.3512249039686992 H2_DY_Y = 0.7275145033029276 H2_DY_Z = -0.5893756987831154 H2_DZ_X = -0.8360768902903288 H2_DZ_Y = -0.527040389707409 H2_DZ_Z = -0.15232813640137977 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 9 H3_INID2 = 3 H3_OUTID2 = 7 H3_INID2_ORIG = 1069 H3_OUTID2_ORIG = 1045 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 47.48818878790554 H3_P_Y = 90.24921541719621 H3_P_Z = 98.24171478318016 # Orientation: H3_DX_X = -0.21067326384003593 H3_DX_Y = 0.9177973313660743 H3_DX_Z = 0.33654841321909146 H3_DY_X = -0.7566808340474154 H3_DY_Y = -0.371071161853763 H3_DY_Z = 0.5382753089505457 H3_DZ_X = 0.6189110528083148 H3_DZ_Y = -0.14125951783083224 H3_DZ_Z = 0.7726544229692252 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 9 H4_INID2 = 3 H4_OUTID2 = 7 H4_INID2_ORIG = 1086 H4_OUTID2_ORIG = 1073 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 33.10964681843605 H4_P_Y = 102.45670032334714 H4_P_Z = 104.33489589591132 # Orientation: H4_DX_X = -0.9789966395779075 H4_DX_Y = 0.19158150524796724 H4_DX_Z = 0.0697288071180111 H4_DY_X = -0.06676808222586317 H4_DY_Y = -0.6244339100717156 H4_DY_Z = 0.7782186808015013 H4_DZ_X = 0.19263333795337445 H4_DZ_Y = 0.7572178146342452 H4_DZ_Z = 0.6241102292940468 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 8 H5_INID2 = 3 H5_OUTID2 = 6 H5_INID2_ORIG = 1267 H5_OUTID2_ORIG = 1089 H5_INSEQ_CHAR = 0 H5_OUTSEQ_CHAR = 0 # Position: H5_P_X = 12.256322849295437 H5_P_Y = 97.95592767189517 H5_P_Z = 94.45321941958052 # Orientation: H5_DX_X = -0.14796543940311224 H5_DX_Y = 0.9272767305270548 H5_DX_Z = -0.3438954692421845 H5_DY_X = -0.9742360651607225 H5_DY_Y = -0.0768185070757994 H5_DY_Z = 0.21204482146660553 H5_DZ_X = 0.1702066922374268 H5_DZ_Y = 0.3664106739625623 H5_DZ_Z = 0.9147529174175304 ## Properties of helix 6 H6_INID = 1 H6_OUTID = 8 H6_INID2 = 3 H6_OUTID2 = 6 H6_INID2_ORIG = 1286 H6_OUTID2_ORIG = 1270 H6_INSEQ_CHAR = 0 H6_OUTSEQ_CHAR = 0 # Position: H6_P_X = 10.280300346426873 H6_P_Y = 90.64144949310933 H6_P_Z = 73.04540091162755 # Orientation: H6_DX_X = 0.7198152616777271 H6_DX_Y = -0.6556871053396378 H6_DX_Z = 0.22790438553734305 H6_DY_X = -0.6923091516756639 H6_DY_Y = -0.7020921598554537 H6_DY_Z = 0.16665724579395658 H6_DZ_X = 0.050734875203923835 H6_DZ_Y = -0.2777427208061738 H6_DZ_Z = -0.9593148354305896 ## Properties of helix 7 H7_INID = 1 H7_OUTID = 12 H7_INID2 = 3 H7_OUTID2 = 10 H7_INID2_ORIG = 912 H7_OUTID2_ORIG = 1293 H7_INSEQ_CHAR = 0 H7_OUTSEQ_CHAR = 0 # Position: H7_P_X = 30.961047913333324 H7_P_Y = 100.20144238634785 H7_P_Z = 77.84730905403302 # Orientation: H7_DX_X = 0.9611671425607966 H7_DX_Y = -0.2232591417738803 H7_DX_Z = -0.1622130687580352 H7_DY_X = -0.2696302513477953 H7_DY_Y = -0.8849745730455538 H7_DY_Z = -0.3796307846065332 H7_DZ_X = -0.058798398104350724 H7_DZ_Y = 0.40862618696949937 H7_DZ_Z = -0.9108059001253395 ############# END of Description of junction: j11