#############  Start of Description of junction: j9
# Number of strands:
NUM_STRANDS = 3
LILLEY = HS1HS4HS5
FINGERPRINT = 55:122:174
LOOP_LENGTH_SUM = 10
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  321
S1_NAME_ID3 = 325
S1_NUM_ID5_ORIG =  321
S1_NUM_ID3_ORIG = 325
S1_NAME2_ID5 =  322
S1_NAME2_ID3 = 324
S1_NUM2_ID5_ORIG =  322
S1_NUM2_ID3_ORIG = 324
S1_SQ2 = GCG
S1_SQLEN2 = 3
S1_SQ = AGCGU
S1_SQLEN = 5
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  303
S2_NAME_ID3 = 310
S2_NUM_ID5_ORIG =  303
S2_NUM_ID3_ORIG = 310
S2_NAME2_ID5 =  304
S2_NAME2_ID3 = 309
S2_NUM2_ID5_ORIG =  304
S2_NUM2_ID3_ORIG = 309
S2_SQ2 = GAAGUC
S2_SQLEN2 = 6
S2_SQ = CGAAGUCU
S2_SQLEN = 8
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  340
S3_NAME_ID3 = 348
S3_NUM_ID5_ORIG =  340
S3_NUM_ID3_ORIG = 348
S3_NAME2_ID5 =  341
S3_NAME2_ID3 = 347
S3_NUM2_ID5_ORIG =  341
S3_NUM2_ID3_ORIG = 347
S3_SQ2 = CCCCGUA
S3_SQLEN2 = 7
S3_SQ = ACCCCGUAC
S3_SQLEN = 9
S3_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 8
H1_INID2 = 2
H1_OUTID2 = 7
H1_INID2_ORIG = 322
H1_OUTID2_ORIG = 309
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 4.401022378661967
H1_P_Y = 140.7379597775767
H1_P_Z = 39.786444309969426
# Orientation:
H1_DX_X = -0.7445867252141842
H1_DX_Y = 0.48994738677248506
H1_DX_Z = -0.4533675846701257
H1_DY_X = -0.6565338787160417
H1_DY_Y = -0.41476414874790635
H1_DY_Z = 0.6300269573688908
H1_DZ_X = 0.12063944103351165
H1_DZ_Y = 0.7667608878315662
H1_DZ_Z = 0.6304949374569802
## Properties of helix 2
H2_INID = 1
H2_OUTID = 5
H2_INID2 = 2
H2_OUTID2 = 4
H2_INID2_ORIG = 341
H2_OUTID2_ORIG = 324
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 6.346921992950483
H2_P_Y = 128.22439146781028
H2_P_Z = 31.2910647776618
# Orientation:
H2_DX_X = -0.245506303514321
H2_DX_Y = 0.5667963318890656
H2_DX_Z = -0.7864277290964736
H2_DY_X = 0.9685107735516176
H2_DY_Y = 0.10877226452100786
H2_DY_Z = -0.2239541827817213
H2_DZ_X = -0.04139488433595684
H2_DZ_Y = -0.8166458918209685
H2_DZ_Z = -0.5756526304315273
## Properties of helix 3
H3_INID = 1
H3_OUTID = 9
H3_INID2 = 2
H3_OUTID2 = 8
H3_INID2_ORIG = 304
H3_OUTID2_ORIG = 347
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 31.13089552882458
H3_P_Y = 133.65200874573682
H3_P_Z = 21.252643240906053
# Orientation:
H3_DX_X = -0.5978727690480667
H3_DX_Y = -0.7234510863820276
H3_DX_Z = -0.3452052688523999
H3_DY_X = -0.266443169430282
H3_DY_Y = 0.5855201818923206
H3_DY_Z = -0.7656201107995564
H3_DZ_X = 0.7560133527225155
H3_DZ_Y = -0.3657658297455555
H3_DZ_Z = -0.5428251728648981
#############  END of Description of junction: j9