#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = HS6HS12HS12HS16
FINGERPRINT = 8:74:77:79:86:138
LOOP_LENGTH_SUM = 46
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  446
S1_NAME_ID3 = 467
S1_NUM_ID5_ORIG =  446
S1_NUM_ID3_ORIG = 467
S1_NAME2_ID5 =  448
S1_NAME2_ID3 = 465
S1_NUM2_ID5_ORIG =  448
S1_NUM2_ID3_ORIG = 465
S1_SQ2 = GACCGAUAGUGAACAAGU
S1_SQLEN2 = 18
S1_SQ = GAGACCGAUAGUGAACAAGUAG
S1_SQLEN = 22
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  25
S2_NAME_ID3 = 36
S2_NUM_ID5_ORIG =  25
S2_NUM_ID3_ORIG = 36
S2_NAME2_ID5 =  27
S2_NAME2_ID3 = 34
S2_NUM2_ID5_ORIG =  27
S2_NUM2_ID3_ORIG = 34
S2_SQ2 = UGCUCGGC
S2_SQLEN2 = 8
S2_SQ = AUUGCUCGGCUC
S2_SQLEN = 12
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  474
S3_NAME_ID3 = 491
S3_NUM_ID5_ORIG =  474
S3_NUM_ID3_ORIG = 491
S3_NAME2_ID5 =  476
S3_NAME2_ID3 = 489
S3_NUM2_ID5_ORIG =  476
S3_NUM2_ID3_ORIG = 489
S3_SQ2 = AACGCUGCAAAGUA
S3_SQLEN2 = 14
S3_SQ = CGAACGCUGCAAAGUACC
S3_SQLEN = 18
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  501
S4_NAME_ID3 = 518
S4_NUM_ID5_ORIG =  501
S4_NUM_ID3_ORIG = 518
S4_NAME2_ID5 =  503
S4_NAME2_ID3 = 516
S4_NUM2_ID5_ORIG =  503
S4_NUM2_ID3_ORIG = 516
S4_SQ2 = GGCGAAAUAGAGCA
S4_SQLEN2 = 14
S4_SQ = GAGGCGAAAUAGAGCAUG
S4_SQLEN = 18
S4_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 12
H1_INID2 = 3
H1_OUTID2 = 10
H1_INID2_ORIG = 448
H1_OUTID2_ORIG = 34
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 46.08014859706745
H1_P_Y = 127.47471625893978
H1_P_Z = 37.3626981724987
# Orientation:
H1_DX_X = -0.18514024574433563
H1_DX_Y = -0.9271170771206272
H1_DX_Z = 0.32584814671413653
H1_DY_X = -0.5814756951039257
H1_DY_Y = -0.16395418311384446
H1_DY_Z = -0.7968720360527541
H1_DZ_X = 0.7922178396180755
H1_DZ_Y = -0.337005862190523
H1_DZ_Z = -0.5087415291089243
## Properties of helix 2
H2_INID = 1
H2_OUTID = 22
H2_INID2 = 3
H2_OUTID2 = 20
H2_INID2_ORIG = 476
H2_OUTID2_ORIG = 465
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 63.92618155533163
H2_P_Y = 144.60603036347928
H2_P_Z = 56.39490842528288
# Orientation:
H2_DX_X = -0.655405764967945
H2_DX_Y = 0.40846349459923204
H2_DX_Z = 0.6352958813234793
H2_DY_X = 0.235058873597616
H2_DY_Y = -0.6890561828414548
H2_DY_Z = 0.6855281925865597
H2_DZ_X = 0.7177677961498361
H2_DZ_Y = 0.5986310637343877
H2_DZ_Z = 0.3555984256748559
## Properties of helix 3
H3_INID = 1
H3_OUTID = 18
H3_INID2 = 3
H3_OUTID2 = 16
H3_INID2_ORIG = 503
H3_OUTID2_ORIG = 489
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 25.77052303872893
H3_P_Y = 171.85505153741633
H3_P_Z = 66.08757445887613
# Orientation:
H3_DX_X = -0.7125773177393562
H3_DX_Y = 0.6896906033732364
H3_DX_Z = -0.12868736481121346
H3_DY_X = -0.3367656913625545
H3_DY_Y = -0.17532518712565093
H3_DY_Z = 0.9251215854580721
H3_DZ_X = 0.6154855281519431
H3_DZ_Y = 0.702558147328773
H3_DZ_Z = 0.35719688444540054
## Properties of helix 4
H4_INID = 1
H4_OUTID = 18
H4_INID2 = 3
H4_OUTID2 = 16
H4_INID2_ORIG = 27
H4_OUTID2_ORIG = 516
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = 28.14356669217377
H4_P_Y = 142.11101639315396
H4_P_Z = 69.38852779515172
# Orientation:
H4_DX_X = -0.7591873641235019
H4_DX_Y = -0.6396553639872877
H4_DX_Z = -0.1203144275534811
H4_DY_X = 0.5945869651012146
H4_DY_Y = -0.7567782945978934
H4_DY_Z = 0.2715749505334344
H4_DZ_X = -0.2647657211327328
H4_DZ_Y = 0.13463888052052653
H4_DZ_Z = 0.9548672602855532
#############  END of Description of junction: j1