############# Start of Description of junction: j13 # Number of strands: NUM_STRANDS = 7 LILLEY = 2HS2HS3HS3HS2HS2HS6 FINGERPRINT = 30:40:42:42:62:63:64:77:91:100:103:104:119:123:130:131:134:141:145:156:163 LOOP_LENGTH_SUM = 18 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 926 S1_NAME_ID3 = 931 S1_NUM_ID5_ORIG = 926 S1_NUM_ID3_ORIG = 931 S1_NAME2_ID5 = 928 S1_NAME2_ID3 = 929 S1_NUM2_ID5_ORIG = 928 S1_NUM2_ID3_ORIG = 929 S1_SQ2 = GA S1_SQLEN2 = 2 S1_SQ = AUGACC S1_SQLEN = 6 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 910 S2_NAME_ID3 = 917 S2_NUM_ID5_ORIG = 910 S2_NUM_ID3_ORIG = 917 S2_NAME2_ID5 = 912 S2_NAME2_ID3 = 915 S2_NUM2_ID5_ORIG = 912 S2_NUM2_ID3_ORIG = 915 S2_SQ2 = AAAC S2_SQLEN2 = 4 S2_SQ = CGAAACAU S2_SQLEN = 8 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 1039 S3_NAME_ID3 = 1047 S3_NUM_ID5_ORIG = 1039 S3_NUM_ID3_ORIG = 1047 S3_NAME2_ID5 = 1041 S3_NAME2_ID3 = 1045 S3_NUM2_ID5_ORIG = 1041 S3_NUM2_ID3_ORIG = 1045 S3_SQ2 = UUCCG S3_SQLEN2 = 5 S3_SQ = GAUUCCGGU S3_SQLEN = 9 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 1067 S4_NAME_ID3 = 1075 S4_NUM_ID5_ORIG = 1067 S4_NUM_ID3_ORIG = 1075 S4_NAME2_ID5 = 1069 S4_NAME2_ID3 = 1073 S4_NUM2_ID5_ORIG = 1069 S4_NUM2_ID3_ORIG = 1073 S4_SQ2 = CAGGA S4_SQLEN2 = 5 S4_SQ = ACCAGGAGG S4_SQLEN = 9 S4_CHAR = A ## Properties of strand 5 S5_NAME_ID5 = 1084 S5_NAME_ID3 = 1091 S5_NUM_ID5_ORIG = 1084 S5_NUM_ID3_ORIG = 1091 S5_NAME2_ID5 = 1086 S5_NAME2_ID3 = 1089 S5_NUM2_ID5_ORIG = 1086 S5_NUM2_ID3_ORIG = 1089 S5_SQ2 = AGAG S5_SQLEN2 = 4 S5_SQ = CCAGAGAU S5_SQLEN = 8 S5_CHAR = A ## Properties of strand 6 S6_NAME_ID5 = 1265 S6_NAME_ID3 = 1272 S6_NUM_ID5_ORIG = 1265 S6_NUM_ID3_ORIG = 1272 S6_NAME2_ID5 = 1267 S6_NAME2_ID3 = 1270 S6_NUM2_ID5_ORIG = 1267 S6_NUM2_ID3_ORIG = 1270 S6_SQ2 = CCGU S6_SQLEN2 = 4 S6_SQ = GUCCGUAC S6_SQLEN = 8 S6_CHAR = A ## Properties of strand 7 S7_NAME_ID5 = 1284 S7_NAME_ID3 = 1295 S7_NUM_ID5_ORIG = 1284 S7_NUM_ID3_ORIG = 1295 S7_NAME2_ID5 = 1286 S7_NAME2_ID3 = 1293 S7_NUM2_ID5_ORIG = 1286 S7_NUM2_ID3_ORIG = 1293 S7_SQ2 = AAUCGAGU S7_SQLEN2 = 8 S7_SQ = GUAAUCGAGUAG S7_SQLEN = 12 S7_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 928 H1_OUTID2_ORIG = 915 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 58.41499469700897 H1_P_Y = 92.23757524955754 H1_P_Z = 81.19673633179076 # Orientation: H1_DX_X = 0.14218865020404792 H1_DX_Y = -0.9861116033367807 H1_DX_Z = 0.0858271141174356 H1_DY_X = 0.2428492383713703 H1_DY_Y = -0.04930454393391415 H1_DY_Z = -0.968810254575132 H1_DZ_X = 0.9595867001869038 H1_DZ_Y = 0.15859687169691483 H1_DZ_Z = 0.23246590526861155 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 1041 H2_OUTID2_ORIG = 929 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 41.45236099585511 H2_P_Y = 84.17692160545297 H2_P_Z = 71.09129921550223 # Orientation: H2_DX_X = -0.42459400082783816 H2_DX_Y = 0.426773451927815 H2_DX_Z = 0.7984887946556398 H2_DY_X = -0.36575198996142433 H2_DY_Y = 0.725914655055405 H2_DY_Z = -0.5824717979568277 H2_DZ_X = -0.8282182178026929 H2_DZ_Y = -0.5393628966710651 H2_DZ_Z = -0.1521257683442343 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 9 H3_INID2 = 3 H3_OUTID2 = 7 H3_INID2_ORIG = 1069 H3_OUTID2_ORIG = 1045 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 47.86196822526248 H3_P_Y = 90.13360897061874 H3_P_Z = 98.3260193761556 # Orientation: H3_DX_X = -0.20887401107347614 H3_DX_Y = 0.9152635871099193 H3_DX_Z = 0.34447672433528 H3_DY_X = -0.7607424356065735 H3_DY_Y = -0.3734163165522233 H3_DY_Z = 0.5308777648385217 H3_DZ_X = 0.614526316902257 H3_DZ_Y = -0.15117149414905384 H3_DZ_Z = 0.7742768143185543 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 9 H4_INID2 = 3 H4_OUTID2 = 7 H4_INID2_ORIG = 1086 H4_OUTID2_ORIG = 1073 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 33.158739591331525 H4_P_Y = 102.55386313901472 H4_P_Z = 104.07693023655122 # Orientation: H4_DX_X = -0.9823707376466118 H4_DX_Y = 0.1673768398001272 H4_DX_Z = 0.08326300087173877 H4_DY_X = -0.036322440732575956 H4_DY_Y = -0.6077982023555535 H4_DY_Z = 0.7932603768704212 H4_DZ_X = 0.18338051727179305 H4_DZ_Y = 0.7762514661576461 H4_DZ_Z = 0.6031627037319538 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 8 H5_INID2 = 3 H5_OUTID2 = 6 H5_INID2_ORIG = 1267 H5_OUTID2_ORIG = 1089 H5_INSEQ_CHAR = A H5_OUTSEQ_CHAR = A # Position: H5_P_X = 12.457720540135625 H5_P_Y = 97.81890515930382 H5_P_Z = 94.03101801309141 # Orientation: H5_DX_X = -0.14550710429999114 H5_DX_Y = 0.9281142961563233 H5_DX_Z = -0.3426828502689858 H5_DY_X = -0.9719761821621162 H5_DY_Y = -0.06946220485251331 H5_DY_Z = 0.22458250912879407 H5_DZ_X = 0.18463473104426598 H5_DZ_Y = 0.36575791907662847 H5_DZ_Z = 0.9122122344744952 ## Properties of helix 6 H6_INID = 1 H6_OUTID = 8 H6_INID2 = 3 H6_OUTID2 = 6 H6_INID2_ORIG = 1286 H6_OUTID2_ORIG = 1270 H6_INSEQ_CHAR = A H6_OUTSEQ_CHAR = A # Position: H6_P_X = 10.744528313445397 H6_P_Y = 90.6845642956126 H6_P_Z = 72.77660331488676 # Orientation: H6_DX_X = 0.7118758628927626 H6_DX_Y = -0.6538838897581059 H6_DX_Z = 0.25625888188606893 H6_DY_X = -0.6967527861124605 H6_DY_Y = -0.7033465051831911 H6_DY_Z = 0.14085186790070736 H6_DZ_X = 0.08813802173410679 H6_DZ_Y = -0.2788181349220622 H6_DZ_Z = -0.956290822272905 ## Properties of helix 7 H7_INID = 1 H7_OUTID = 12 H7_INID2 = 3 H7_OUTID2 = 10 H7_INID2_ORIG = 912 H7_OUTID2_ORIG = 1293 H7_INSEQ_CHAR = A H7_OUTSEQ_CHAR = A # Position: H7_P_X = 31.39689732788631 H7_P_Y = 100.47502098549877 H7_P_Z = 77.66616218150509 # Orientation: H7_DX_X = 0.958640125997757 H7_DX_Y = -0.21615335505245525 H7_DX_Z = -0.18516704870621936 H7_DY_X = -0.2721536211522597 H7_DY_Y = -0.886581499273035 H7_DY_Z = -0.3740396391300038 H7_DZ_X = -0.0833157567373668 H7_DZ_Y = 0.4089632896072146 H7_DZ_Z = -0.9087395184721174 ############# END of Description of junction: j13