############# Start of Description of junction: j3 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS3 FINGERPRINT = 50 LOOP_LENGTH_SUM = 4 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 258 S1_NAME_ID3 = 266 S1_NUM_ID5_ORIG = 258 S1_NUM_ID3_ORIG = 266 S1_NAME2_ID5 = 260 S1_NAME2_ID3 = 264 S1_NUM2_ID5_ORIG = 260 S1_NUM2_ID3_ORIG = 264 S1_SQ2 = CAAUG S1_SQLEN2 = 5 S1_SQ = GGCAAUGUG S1_SQLEN = 9 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 245 S2_NAME_ID3 = 251 S2_NUM_ID5_ORIG = 245 S2_NUM_ID3_ORIG = 251 S2_NAME2_ID5 = 247 S2_NAME2_ID3 = 249 S2_NUM2_ID5_ORIG = 247 S2_NUM2_ID3_ORIG = 249 S2_SQ2 = AAG S2_SQLEN2 = 3 S2_SQ = CGAAGCC S2_SQLEN = 7 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 260 H1_OUTID2_ORIG = 249 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 84.77399744773636 H1_P_Y = 135.46331211428392 H1_P_Z = -4.873877393213096 # Orientation: H1_DX_X = -0.2795351743336454 H1_DX_Y = -0.40792098427780843 H1_DX_Z = 0.8691723401581894 H1_DY_X = 0.38404118258090136 H1_DY_Y = 0.7821864927530839 H1_DY_Z = 0.49060845960549226 H1_DZ_X = -0.879984350083646 H1_DZ_Y = 0.4709402946663488 H1_DZ_Z = -0.06199018041153881 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 247 H2_OUTID2_ORIG = 264 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 88.73315305855644 H2_P_Y = 113.35283211829632 H2_P_Z = 0.5506447630399318 # Orientation: H2_DX_X = -0.3943082422501618 H2_DX_Y = 0.8398063820023367 H2_DX_Z = -0.3731571396097644 H2_DY_X = -0.2852618865348404 H2_DY_Y = -0.4978513958730275 H2_DY_Z = -0.8190052769780216 H2_DZ_X = -0.8735826613344386 H2_DZ_Y = -0.216493021539776 H2_DZ_Z = 0.4358716616624724 ############# END of Description of junction: j3