############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS2 FINGERPRINT = 141 LOOP_LENGTH_SUM = 3 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 354 S1_NAME_ID3 = 361 S1_NUM_ID5_ORIG = 354 S1_NUM_ID3_ORIG = 361 S1_NAME2_ID5 = 356 S1_NAME2_ID3 = 359 S1_NUM2_ID5_ORIG = 356 S1_NUM2_ID3_ORIG = 359 S1_SQ2 = CAGU S1_SQLEN2 = 4 S1_SQ = ACCAGUAC S1_SQLEN = 8 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 291 S2_NAME_ID3 = 297 S2_NUM_ID5_ORIG = 291 S2_NUM_ID3_ORIG = 297 S2_NAME2_ID5 = 293 S2_NAME2_ID3 = 295 S2_NUM2_ID5_ORIG = 293 S2_NUM2_ID3_ORIG = 295 S2_SQ2 = ACC S2_SQLEN2 = 3 S2_SQ = CGACCGU S2_SQLEN = 7 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 356 H1_OUTID2_ORIG = 295 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 39.615870446922905 H1_P_Y = 128.80959641090922 H1_P_Z = 14.167926710791253 # Orientation: H1_DX_X = 0.11857748310913507 H1_DX_Y = -0.7753856082902075 H1_DX_Z = 0.6202552208211589 H1_DY_X = 0.6133142252219699 H1_DY_Y = 0.548451131496762 H1_DY_Z = 0.5683722525777437 H1_DZ_X = -0.7808873424764045 H1_DZ_Y = 0.31301519901805364 H1_DZ_Z = 0.540588978378036 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 293 H2_OUTID2_ORIG = 359 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 60.423381733609 H2_P_Y = 119.66408900618653 H2_P_Z = 0.7782653992669504 # Orientation: H2_DX_X = -0.9415539468943663 H2_DX_Y = -0.33680295982595965 H2_DX_Z = 0.006319124947515631 H2_DY_X = -0.22063429466889062 H2_DY_Y = 0.602404878180522 H2_DY_Z = -0.7670911749982974 H2_DZ_X = 0.25455190650158954 H2_DZ_Y = -0.7236519391232008 H2_DZ_Z = -0.6415069741628914 ############# END of Description of junction: j4