#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = HS6HS12HS12HS16
FINGERPRINT = 9:74:78:78:86:139
LOOP_LENGTH_SUM = 46
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  446
S1_NAME_ID3 = 467
S1_NUM_ID5_ORIG =  446
S1_NUM_ID3_ORIG = 467
S1_NAME2_ID5 =  448
S1_NAME2_ID3 = 465
S1_NUM2_ID5_ORIG =  448
S1_NUM2_ID3_ORIG = 465
S1_SQ2 = GACCGAUAGUGAACAAGU
S1_SQLEN2 = 18
S1_SQ = GAGACCGAUAGUGAACAAGUAG
S1_SQLEN = 22
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  25
S2_NAME_ID3 = 36
S2_NUM_ID5_ORIG =  25
S2_NUM_ID3_ORIG = 36
S2_NAME2_ID5 =  27
S2_NAME2_ID3 = 34
S2_NUM2_ID5_ORIG =  27
S2_NUM2_ID3_ORIG = 34
S2_SQ2 = UGCUCGGC
S2_SQLEN2 = 8
S2_SQ = AUUGCUCGGCUC
S2_SQLEN = 12
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  474
S3_NAME_ID3 = 491
S3_NUM_ID5_ORIG =  474
S3_NUM_ID3_ORIG = 491
S3_NAME2_ID5 =  476
S3_NAME2_ID3 = 489
S3_NUM2_ID5_ORIG =  476
S3_NUM2_ID3_ORIG = 489
S3_SQ2 = AACGCUGCAAAGUA
S3_SQLEN2 = 14
S3_SQ = CGAACGCUGCAAAGUACC
S3_SQLEN = 18
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  501
S4_NAME_ID3 = 518
S4_NUM_ID5_ORIG =  501
S4_NUM_ID3_ORIG = 518
S4_NAME2_ID5 =  503
S4_NAME2_ID3 = 516
S4_NUM2_ID5_ORIG =  503
S4_NUM2_ID3_ORIG = 516
S4_SQ2 = GGCGAAAUAGAGCA
S4_SQLEN2 = 14
S4_SQ = GAGGCGAAAUAGAGCAUG
S4_SQLEN = 18
S4_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 12
H1_INID2 = 3
H1_OUTID2 = 10
H1_INID2_ORIG = 448
H1_OUTID2_ORIG = 34
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 45.35691401785776
H1_P_Y = 126.88026902879147
H1_P_Z = 37.02028400843158
# Orientation:
H1_DX_X = -0.1810588830090083
H1_DX_Y = -0.9393356336735224
H1_DX_Z = 0.29131812198128415
H1_DY_X = -0.5822760073373558
H1_DY_Y = -0.13632951671475269
H1_DY_Z = -0.8014792038172871
H1_DZ_X = 0.7925732345738083
H1_DZ_Y = -0.31474248233038793
H1_DZ_Z = -0.5222689323075969
## Properties of helix 2
H2_INID = 1
H2_OUTID = 22
H2_INID2 = 3
H2_OUTID2 = 20
H2_INID2_ORIG = 476
H2_OUTID2_ORIG = 465
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 63.34516097612105
H2_P_Y = 143.79256743362302
H2_P_Z = 55.931056646052035
# Orientation:
H2_DX_X = -0.6510433349610167
H2_DX_Y = 0.43204407086199126
H2_DX_Z = 0.6240837258219685
H2_DY_X = 0.22794100654946448
H2_DY_Y = -0.6729681232207554
H2_DY_Z = 0.7036737899495407
H2_DZ_X = 0.7240065424677056
H2_DZ_Y = 0.6003764035684185
H2_DZ_Z = 0.3396508508781011
## Properties of helix 3
H3_INID = 1
H3_OUTID = 18
H3_INID2 = 3
H3_OUTID2 = 16
H3_INID2_ORIG = 503
H3_OUTID2_ORIG = 489
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 24.99670413548752
H3_P_Y = 171.16754764253756
H3_P_Z = 66.24025042088157
# Orientation:
H3_DX_X = -0.7172873870968708
H3_DX_Y = 0.6819898825463895
H3_DX_Z = -0.1427886704752268
H3_DY_X = -0.34408358318522403
H3_DY_Y = -0.16849725615446687
H3_DY_Z = 0.9236964666224736
H3_DZ_X = 0.6058921455953694
H3_DZ_Y = 0.7116870623896148
H3_DZ_Z = 0.35552247908267987
## Properties of helix 4
H4_INID = 1
H4_OUTID = 18
H4_INID2 = 3
H4_OUTID2 = 16
H4_INID2_ORIG = 27
H4_OUTID2_ORIG = 516
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = 27.62636568351645
H4_P_Y = 141.56875085860247
H4_P_Z = 68.9959435376596
# Orientation:
H4_DX_X = -0.76329057756654
H4_DX_Y = -0.6328302532172358
H4_DX_Z = -0.13005139296126345
H4_DY_X = 0.5880453572295501
H4_DY_Y = -0.7639005061677722
H4_DY_Z = 0.26581699441044293
H4_DZ_X = -0.2675633607931367
H4_DZ_Y = 0.12641948935845448
H4_DZ_Z = 0.9552109508749567
#############  END of Description of junction: j1