#############  Start of Description of junction: j42
# Number of strands:
NUM_STRANDS = 5
LILLEY = HS7HS8HS8HS9HS11
FINGERPRINT = 20:24:29:45:109:127:131:151:154:171
LOOP_LENGTH_SUM = 43
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  2479
S1_NAME_ID3 = 2492
S1_NUM_ID5_ORIG =  2479
S1_NUM_ID3_ORIG = 2492
S1_NAME2_ID5 =  2481
S1_NAME2_ID3 = 2490
S1_NUM2_ID5_ORIG =  2481
S1_NUM2_ID3_ORIG = 2490
S1_SQ2 = GGAUAACAGA
S1_SQLEN2 = 10
S1_SQ = AGGGAUAACAGAGU
S1_SQLEN = 14
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  2093
S2_NAME_ID3 = 2107
S2_NUM_ID5_ORIG =  2093
S2_NUM_ID3_ORIG = 2107
S2_NAME2_ID5 =  2095
S2_NAME2_ID3 = 2105
S2_NUM2_ID5_ORIG =  2095
S2_NUM2_ID3_ORIG = 2105
S2_SQ2 = AAGCGAAGACC
S2_SQLEN2 = 11
S2_SQ = GGAAGCGAAGACCCU
S2_SQLEN = 15
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  2529
S3_NAME_ID3 = 2545
S3_NUM_ID5_ORIG =  2529
S3_NUM_ID3_ORIG = 2545
S3_NAME2_ID5 =  2531
S3_NAME2_ID3 = 2543
S3_NUM2_ID5_ORIG =  2531
S3_NUM2_ID3_ORIG = 2543
S3_SQ2 = UACCUCGAUGUCG
S3_SQLEN2 = 13
S3_SQ = GCUACCUCGAUGUCGGU
S3_SQLEN = 17
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  2613
S4_NAME_ID3 = 2625
S4_NUM_ID5_ORIG =  2613
S4_NUM_ID3_ORIG = 2625
S4_NAME2_ID5 =  2615
S4_NAME2_ID3 = 2623
S4_NUM2_ID5_ORIG =  2615
S4_NUM2_ID3_ORIG = 2623
S4_SQ2 = UGGGUUUAG
S4_SQLEN2 = 9
S4_SQ = GCUGGGUUUAGAC
S4_SQLEN = 13
S4_CHAR = A
## Properties of strand 5
S5_NAME_ID5 =  2639
S5_NAME_ID3 = 2652
S5_NUM_ID5_ORIG =  2639
S5_NUM_ID3_ORIG = 2652
S5_NAME2_ID5 =  2641
S5_NAME2_ID3 = 2650
S5_NUM2_ID5_ORIG =  2641
S5_NUM2_ID3_ORIG = 2650
S5_SQ2 = CGGCUGCUAU
S5_SQLEN2 = 10
S5_SQ = GUCGGCUGCUAUCU
S5_SQLEN = 14
S5_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 15
H1_INID2 = 3
H1_OUTID2 = 13
H1_INID2_ORIG = 2481
H1_OUTID2_ORIG = 2105
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 71.09002363862052
H1_P_Y = 112.794009869434
H1_P_Z = 82.73405667904207
# Orientation:
H1_DX_X = -0.39018891854641424
H1_DX_Y = -0.8792557493544564
H1_DX_Z = 0.2732433623543926
H1_DY_X = -0.672036513131971
H1_DY_Y = 0.06910685307114761
H1_DY_Z = -0.7372863540552146
H1_DZ_X = 0.6293802768287406
H1_DZ_Y = -0.47131048162093236
H1_DZ_Z = -0.6178566962113763
## Properties of helix 2
H2_INID = 1
H2_OUTID = 14
H2_INID2 = 3
H2_OUTID2 = 12
H2_INID2_ORIG = 2531
H2_OUTID2_ORIG = 2490
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 63.292726248871276
H2_P_Y = 108.08116520130756
H2_P_Z = 115.35240819883613
# Orientation:
H2_DX_X = -0.5747257157066628
H2_DX_Y = -0.8091456452566916
H2_DX_Z = -0.12236697457892376
H2_DY_X = 0.8163432213397783
H2_DY_Y = -0.5773286877504518
H2_DY_Z = -0.016593109200726985
H2_DZ_X = -0.05721972280661447
H2_DZ_Y = -0.10942993677456059
H2_DZ_Z = 0.9923462058472552
## Properties of helix 3
H3_INID = 1
H3_OUTID = 17
H3_INID2 = 3
H3_OUTID2 = 15
H3_INID2_ORIG = 2615
H3_OUTID2_ORIG = 2543
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 64.24670348075624
H3_P_Y = 130.28541276831618
H3_P_Z = 113.96422268305177
# Orientation:
H3_DX_X = 0.7343289144996703
H3_DX_Y = 0.5388243428042188
H3_DX_Z = 0.4128309253572695
H3_DY_X = -0.44476773823566873
H3_DY_Y = 0.8413783148266418
H3_DY_Z = -0.30702473901008887
H3_DZ_X = -0.5127793915071663
H3_DZ_Y = 0.04184326637692948
H3_DZ_Z = 0.8575001088655654
## Properties of helix 4
H4_INID = 1
H4_OUTID = 13
H4_INID2 = 3
H4_OUTID2 = 11
H4_INID2_ORIG = 2641
H4_OUTID2_ORIG = 2623
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = 90.80891155538455
H4_P_Y = 119.15156212939728
H4_P_Z = 94.4633509582392
# Orientation:
H4_DX_X = 0.7338303479650392
H4_DX_Y = 0.670436367038576
H4_DX_Z = -0.10958146813050007
H4_DY_X = 0.32401119361021813
H4_DY_Y = -0.20364287668543568
H4_DY_Z = 0.9238757087349683
H4_DZ_X = 0.5970843883579562
H4_DZ_Y = -0.7134736551039538
H4_DZ_Z = -0.36666821058254584
## Properties of helix 5
H5_INID = 1
H5_OUTID = 14
H5_INID2 = 3
H5_OUTID2 = 12
H5_INID2_ORIG = 2095
H5_OUTID2_ORIG = 2650
H5_INSEQ_CHAR = A
H5_OUTSEQ_CHAR = A
# Position:
H5_P_X = 48.1759362872631
H5_P_Y = 140.34075259083312
H5_P_Z = 107.71458655882893
# Orientation:
H5_DX_X = -0.7325277345998344
H5_DX_Y = -0.6675167830173905
H5_DX_Z = -0.13350828600565023
H5_DY_X = 0.42553359284798375
H5_DY_Y = -0.6020970589418368
H5_DY_Z = 0.6755740469937308
H5_DZ_X = -0.5313419608876728
H5_DZ_Y = 0.4380644655797994
H5_DZ_Z = 0.7251036095595822
#############  END of Description of junction: j42