############# Start of Description of junction: j13 # Number of strands: NUM_STRANDS = 7 LILLEY = 2HS2HS3HS3HS2HS2HS6 FINGERPRINT = 30:40:41:41:62:63:65:77:92:102:102:105:118:124:129:130:135:142:144:158:165 LOOP_LENGTH_SUM = 18 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 926 S1_NAME_ID3 = 931 S1_NUM_ID5_ORIG = 926 S1_NUM_ID3_ORIG = 931 S1_NAME2_ID5 = 928 S1_NAME2_ID3 = 929 S1_NUM2_ID5_ORIG = 928 S1_NUM2_ID3_ORIG = 929 S1_SQ2 = GA S1_SQLEN2 = 2 S1_SQ = AUGACC S1_SQLEN = 6 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 910 S2_NAME_ID3 = 917 S2_NUM_ID5_ORIG = 910 S2_NUM_ID3_ORIG = 917 S2_NAME2_ID5 = 912 S2_NAME2_ID3 = 915 S2_NUM2_ID5_ORIG = 912 S2_NUM2_ID3_ORIG = 915 S2_SQ2 = AAAC S2_SQLEN2 = 4 S2_SQ = CGAAACAU S2_SQLEN = 8 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 1039 S3_NAME_ID3 = 1047 S3_NUM_ID5_ORIG = 1039 S3_NUM_ID3_ORIG = 1047 S3_NAME2_ID5 = 1041 S3_NAME2_ID3 = 1045 S3_NUM2_ID5_ORIG = 1041 S3_NUM2_ID3_ORIG = 1045 S3_SQ2 = UUCCG S3_SQLEN2 = 5 S3_SQ = GAUUCCGGU S3_SQLEN = 9 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 1067 S4_NAME_ID3 = 1075 S4_NUM_ID5_ORIG = 1067 S4_NUM_ID3_ORIG = 1075 S4_NAME2_ID5 = 1069 S4_NAME2_ID3 = 1073 S4_NUM2_ID5_ORIG = 1069 S4_NUM2_ID3_ORIG = 1073 S4_SQ2 = CAGGA S4_SQLEN2 = 5 S4_SQ = ACCAGGAGG S4_SQLEN = 9 S4_CHAR = A ## Properties of strand 5 S5_NAME_ID5 = 1084 S5_NAME_ID3 = 1091 S5_NUM_ID5_ORIG = 1084 S5_NUM_ID3_ORIG = 1091 S5_NAME2_ID5 = 1086 S5_NAME2_ID3 = 1089 S5_NUM2_ID5_ORIG = 1086 S5_NUM2_ID3_ORIG = 1089 S5_SQ2 = AGAG S5_SQLEN2 = 4 S5_SQ = CCAGAGAU S5_SQLEN = 8 S5_CHAR = A ## Properties of strand 6 S6_NAME_ID5 = 1265 S6_NAME_ID3 = 1272 S6_NUM_ID5_ORIG = 1265 S6_NUM_ID3_ORIG = 1272 S6_NAME2_ID5 = 1267 S6_NAME2_ID3 = 1270 S6_NUM2_ID5_ORIG = 1267 S6_NUM2_ID3_ORIG = 1270 S6_SQ2 = CCGU S6_SQLEN2 = 4 S6_SQ = GUCCGUAC S6_SQLEN = 8 S6_CHAR = A ## Properties of strand 7 S7_NAME_ID5 = 1284 S7_NAME_ID3 = 1295 S7_NUM_ID5_ORIG = 1284 S7_NUM_ID3_ORIG = 1295 S7_NAME2_ID5 = 1286 S7_NAME2_ID3 = 1293 S7_NUM2_ID5_ORIG = 1286 S7_NUM2_ID3_ORIG = 1293 S7_SQ2 = AAUCGAGU S7_SQLEN2 = 8 S7_SQ = GUAAUCGAGUAG S7_SQLEN = 12 S7_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 928 H1_OUTID2_ORIG = 915 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 57.58889951678131 H1_P_Y = 91.40248661682989 H1_P_Z = 80.7420888852227 # Orientation: H1_DX_X = 0.15699156687465887 H1_DX_Y = -0.986246274134686 H1_DX_Z = 0.05169076015771168 H1_DY_X = 0.2353124764043315 H1_DY_Y = -0.013477735738490537 H1_DY_Z = -0.9718263163178023 H1_DZ_X = 0.9591567579799971 H1_DZ_Y = 0.16473201690868677 H1_DZ_Z = 0.22996016225967253 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 1041 H2_OUTID2_ORIG = 929 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 40.706451487790524 H2_P_Y = 83.41795760624917 H2_P_Z = 70.47571056808722 # Orientation: H2_DX_X = -0.40354747885817943 H2_DX_Y = 0.43070749385969975 H2_DX_Z = 0.8072425205849356 H2_DY_X = -0.3634045188524837 H2_DY_Y = 0.7342456179165708 H2_DY_Z = -0.5734287473155888 H2_DZ_X = -0.8396943419988077 H2_DZ_Y = -0.5247613050744349 H2_DZ_Z = -0.1397819184006437 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 9 H3_INID2 = 3 H3_OUTID2 = 7 H3_INID2_ORIG = 1069 H3_OUTID2_ORIG = 1045 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 47.220606111264466 H3_P_Y = 89.54771882729663 H3_P_Z = 97.7273821142664 # Orientation: H3_DX_X = -0.20959504578550536 H3_DX_Y = 0.9093480813620687 H3_DX_Z = 0.3593827815926858 H3_DY_X = -0.7449974514109741 H3_DY_Y = -0.38656594451953197 H3_DY_Z = 0.5436410285555127 H3_DZ_X = 0.6332840706770781 H3_DZ_Y = -0.15379479009656905 H3_DZ_Z = 0.7584843099008793 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 9 H4_INID2 = 3 H4_OUTID2 = 7 H4_INID2_ORIG = 1086 H4_OUTID2_ORIG = 1073 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 32.77698690529741 H4_P_Y = 101.75373300059847 H4_P_Z = 103.91136745933638 # Orientation: H4_DX_X = -0.9851915746523936 H4_DX_Y = 0.15711833736013148 H4_DX_Z = 0.06863956074397493 H4_DY_X = -0.04676740001401214 H4_DY_Y = -0.6314023074362325 H4_DY_Z = 0.7740438853580116 H4_DZ_X = 0.16495566534638328 H4_DZ_Y = 0.7593714204718083 H4_DZ_Z = 0.6294002496351112 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 8 H5_INID2 = 3 H5_OUTID2 = 6 H5_INID2_ORIG = 1267 H5_OUTID2_ORIG = 1089 H5_INSEQ_CHAR = A H5_OUTSEQ_CHAR = A # Position: H5_P_X = 11.79658772827137 H5_P_Y = 97.14998535460344 H5_P_Z = 93.84237117742003 # Orientation: H5_DX_X = -0.1381995886997256 H5_DX_Y = 0.937894274112594 H5_DX_Z = -0.3182062291502774 H5_DY_X = -0.97273059654629 H5_DY_Y = -0.06811100859381725 H5_DY_Z = 0.22171169804735769 H5_DZ_X = 0.18626878489413023 H5_DZ_Y = 0.34016940058614864 H5_DZ_Z = 0.9217313701284837 ## Properties of helix 6 H6_INID = 1 H6_OUTID = 8 H6_INID2 = 3 H6_OUTID2 = 6 H6_INID2_ORIG = 1286 H6_OUTID2_ORIG = 1270 H6_INSEQ_CHAR = A H6_OUTSEQ_CHAR = A # Position: H6_P_X = 9.972050955387132 H6_P_Y = 90.1797877946613 H6_P_Z = 72.5833183642873 # Orientation: H6_DX_X = 0.7097420619242847 H6_DX_Y = -0.6633212962570241 H6_DX_Z = 0.23721522604455458 H6_DY_X = -0.7019553941818906 H6_DY_Y = -0.6942947592580424 H6_DY_Z = 0.15878731638818522 H6_DZ_X = 0.059370279723156116 H6_DZ_Y = -0.2792125448448246 H6_DZ_Z = -0.9583921560023754 ## Properties of helix 7 H7_INID = 1 H7_OUTID = 12 H7_INID2 = 3 H7_OUTID2 = 10 H7_INID2_ORIG = 912 H7_OUTID2_ORIG = 1293 H7_INSEQ_CHAR = A H7_OUTSEQ_CHAR = A # Position: H7_P_X = 30.812082576299012 H7_P_Y = 99.85039963982743 H7_P_Z = 77.18581483549322 # Orientation: H7_DX_X = 0.9583211940563601 H7_DX_Y = -0.2293375528697652 H7_DX_Z = -0.1703665925764284 H7_DY_X = -0.278919810891221 H7_DY_Y = -0.8801252857957707 H7_DY_Z = -0.38416561584205056 H7_DZ_X = -0.0618403437474484 H7_DZ_Y = 0.4156726694727553 H7_DZ_Z = -0.9074095016796946 ############# END of Description of junction: j13