############# Start of Description of junction: j9 # Number of strands: NUM_STRANDS = 2 LILLEY = HS3HS5 FINGERPRINT = 138 LOOP_LENGTH_SUM = 8 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 478 S1_NAME_ID3 = 488 S1_NUM_ID5_ORIG = 478 S1_NUM_ID3_ORIG = 488 S1_NAME2_ID5 = 480 S1_NAME2_ID3 = 486 S1_NUM2_ID5_ORIG = 480 S1_NUM2_ID3_ORIG = 486 S1_SQ2 = UGACGGU S1_SQLEN2 = 7 S1_SQ = ACUGACGGUAC S1_SQLEN = 11 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 446 S2_NAME_ID3 = 454 S2_NUM_ID5_ORIG = 446 S2_NUM_ID3_ORIG = 454 S2_NAME2_ID5 = 448 S2_NAME2_ID3 = 452 S2_NUM2_ID5_ORIG = 448 S2_NUM2_ID3_ORIG = 452 S2_SQ2 = ACGAA S2_SQLEN2 = 5 S2_SQ = GGACGAAAC S2_SQLEN = 9 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 9 H1_INID2 = 3 H1_OUTID2 = 7 H1_INID2_ORIG = 480 H1_OUTID2_ORIG = 452 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 101.78193356155681 H1_P_Y = 69.112667929356 H1_P_Z = 28.93843406391166 # Orientation: H1_DX_X = 0.582868112855877 H1_DX_Y = -0.5632016149919963 H1_DX_Z = -0.5857206705301259 H1_DY_X = -0.19222036940305998 H1_DY_Y = -0.7959371477236772 H1_DY_Z = 0.5740517280350659 H1_DZ_X = -0.7895037001828342 H1_DZ_Y = -0.22200900374514276 H1_DZ_Z = -0.5721852057277417 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 11 H2_INID2 = 3 H2_OUTID2 = 9 H2_INID2_ORIG = 448 H2_OUTID2_ORIG = 486 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 132.3552373923118 H2_P_Y = 77.90864186691965 H2_P_Z = 44.92153562815287 # Orientation: H2_DX_X = -0.4927592948171764 H2_DX_Y = 0.5380691748739395 H2_DX_Z = -0.683863904897585 H2_DY_X = -0.6860707876319907 H2_DY_Y = 0.24318386236335243 H2_DY_Z = 0.6856883282104747 H2_DZ_X = 0.535252418704772 H2_DZ_Y = 0.8070583449395343 H2_DZ_Z = 0.2493224340771647 ############# END of Description of junction: j9