############# Start of Description of junction: j9 # Number of strands: NUM_STRANDS = 2 LILLEY = 2HS2 FINGERPRINT = 80 LOOP_LENGTH_SUM = 2 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 247 S1_NAME_ID3 = 254 S1_NUM_ID5_ORIG = 247 S1_NUM_ID3_ORIG = 254 S1_NAME2_ID5 = 249 S1_NAME2_ID3 = 252 S1_NUM2_ID5_ORIG = 249 S1_NUM2_ID3_ORIG = 252 S1_SQ2 = UAGU S1_SQLEN2 = 4 S1_SQ = GCUAGUUG S1_SQLEN = 8 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 272 S2_NAME_ID3 = 277 S2_NUM_ID5_ORIG = 272 S2_NUM_ID3_ORIG = 277 S2_NAME2_ID5 = 274 S2_NAME2_ID3 = 275 S2_NUM2_ID5_ORIG = 274 S2_NUM2_ID3_ORIG = 275 S2_SQ2 = AG S2_SQLEN2 = 2 S2_SQ = CAAGGC S2_SQLEN = 6 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 249 H1_OUTID2_ORIG = 275 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 138.92333918172827 H1_P_Y = 78.3136808844123 H1_P_Z = -42.08461446812901 # Orientation: H1_DX_X = -0.6644197160990757 H1_DX_Y = -0.19952309532258994 H1_DX_Z = 0.7202339726031539 H1_DY_X = 0.7404533022569524 H1_DY_Y = -0.04503026088239892 H1_DY_Z = 0.6705976310587971 H1_DZ_X = -0.10136739138215489 H1_DZ_Y = 0.9788579110564228 H1_DZ_Z = 0.17765652795949194 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 274 H2_OUTID2_ORIG = 252 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 124.74088838645108 H2_P_Y = 60.84841456352113 H2_P_Z = -38.40440601046376 # Orientation: H2_DX_X = -0.12531412876516868 H2_DX_Y = 0.9836638182190356 H2_DX_Z = -0.12923568337953384 H2_DY_X = -0.6326949955125087 H2_DY_Y = -0.17957153641283696 H2_DY_Z = -0.7532935058553036 H2_DZ_X = -0.7641946164330591 H2_DZ_Y = -0.012631549274843223 H2_DZ_Z = 0.6448620256904931 ############# END of Description of junction: j9