#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 5
LILLEY = 3HS2HS4HS1
FINGERPRINT = 36:67:73:82:107:108:117:119:127:170
LOOP_LENGTH_SUM = 7
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  105
S1_NAME_ID3 = 114
S1_NUM_ID5_ORIG =  105
S1_NUM_ID3_ORIG = 114
S1_NAME2_ID5 =  107
S1_NAME2_ID3 = 112
S1_NUM2_ID5_ORIG =  107
S1_NUM2_ID3_ORIG = 112
S1_SQ2 = GGACGG
S1_SQLEN2 = 6
S1_SQ = GCGGACGGGU
S1_SQLEN = 10
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  56
S2_NAME_ID3 = 62
S2_NUM_ID5_ORIG =  56
S2_NUM_ID3_ORIG = 62
S2_NAME2_ID5 =  58
S2_NAME2_ID3 = 60
S2_NUM2_ID5_ORIG =  58
S2_NUM2_ID3_ORIG = 60
S2_SQ2 = CAA
S2_SQLEN2 = 3
S2_SQ = UGCAAGU
S2_SQLEN = 7
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  313
S3_NAME_ID3 = 318
S3_NUM_ID5_ORIG =  313
S3_NUM_ID3_ORIG = 318
S3_NAME2_ID5 =  315
S3_NAME2_ID3 = 316
S3_NUM2_ID5_ORIG =  315
S3_NUM2_ID3_ORIG = 316
S3_SQ2 = AG
S3_SQLEN2 = 2
S3_SQ = ACAGGG
S3_SQLEN = 6
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  335
S4_NAME_ID3 = 340
S4_NUM_ID5_ORIG =  335
S4_NUM_ID3_ORIG = 340
S4_NAME2_ID5 =  337
S4_NAME2_ID3 = 338
S4_NUM2_ID5_ORIG =  337
S4_NUM2_ID3_ORIG = 338
S4_SQ2 = CA
S4_SQLEN2 = 2
S4_SQ = CCCACU
S4_SQLEN = 6
S4_CHAR = A
## Properties of strand 5
S5_NAME_ID5 =  349
S5_NAME_ID3 = 356
S5_NUM_ID5_ORIG =  349
S5_NUM_ID3_ORIG = 356
S5_NAME2_ID5 =  351
S5_NAME2_ID3 = 354
S5_NUM2_ID5_ORIG =  351
S5_NUM2_ID3_ORIG = 354
S5_SQ2 = GCAG
S5_SQLEN2 = 4
S5_SQ = AGGCAGCA
S5_SQLEN = 8
S5_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 7
H1_INID2 = 3
H1_OUTID2 = 5
H1_INID2_ORIG = 107
H1_OUTID2_ORIG = 60
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 115.39395944926898
H1_P_Y = 44.14391601172627
H1_P_Z = 8.565407991002397
# Orientation:
H1_DX_X = -0.12958261203543486
H1_DX_Y = 0.8063226933344154
H1_DX_Z = 0.577106628684863
H1_DY_X = -0.9405571368392174
H1_DY_Y = 0.08432035355878043
H1_DY_Z = -0.32900205214640543
H1_DZ_X = -0.31394365577106953
H1_DZ_Y = -0.585434703608918
H1_DZ_Z = 0.7474661121491977
## Properties of helix 2
H2_INID = 1
H2_OUTID = 10
H2_INID2 = 3
H2_OUTID2 = 8
H2_INID2_ORIG = 315
H2_OUTID2_ORIG = 112
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 130.8309295292138
H2_P_Y = 70.04980693436292
H2_P_Z = -1.122108385970073
# Orientation:
H2_DX_X = 0.8391820423668435
H2_DX_Y = -0.42936892520958736
H2_DX_Z = 0.3337900924733712
H2_DY_X = 0.3368366320439691
H2_DY_Y = -0.07152162019853847
H2_DY_Z = -0.9388427670049186
H2_DZ_X = 0.4269831180296251
H2_DZ_Y = 0.9002927212348908
H2_DZ_Z = 0.08460752336034028
## Properties of helix 3
H3_INID = 1
H3_OUTID = 6
H3_INID2 = 3
H3_OUTID2 = 4
H3_INID2_ORIG = 337
H3_OUTID2_ORIG = 316
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 133.36878377261215
H3_P_Y = 49.70541094662976
H3_P_Z = -7.9173132130035135
# Orientation:
H3_DX_X = 0.5793569143126547
H3_DX_Y = 0.4837410429299993
H3_DX_Z = -0.6560031777538082
H3_DY_X = -0.22686197371447747
H3_DY_Y = -0.6773320639002662
H3_DY_Z = -0.6998249210302401
H3_DZ_X = -0.7828660234806932
H3_DZ_Y = 0.5542705824753966
H3_DZ_Z = -0.28267456674049285
## Properties of helix 4
H4_INID = 1
H4_OUTID = 6
H4_INID2 = 3
H4_OUTID2 = 4
H4_INID2_ORIG = 351
H4_OUTID2_ORIG = 338
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = 144.7452998349192
H4_P_Y = 37.65791432663235
H4_P_Z = -4.000970098044792
# Orientation:
H4_DX_X = 0.43711465677230876
H4_DX_Y = 0.6698745596268623
H4_DX_Z = 0.600165686456295
H4_DY_X = -0.596876575418321
H4_DY_Y = -0.28311816956372127
H4_DY_Z = 0.7507212903466769
H4_DZ_X = 0.672806904357941
H4_DZ_Y = -0.6863761187771686
H4_DZ_Z = 0.2760773315950713
## Properties of helix 5
H5_INID = 1
H5_OUTID = 8
H5_INID2 = 3
H5_OUTID2 = 6
H5_INID2_ORIG = 58
H5_OUTID2_ORIG = 354
H5_INSEQ_CHAR = A
H5_OUTSEQ_CHAR = A
# Position:
H5_P_X = 142.15924734712152
H5_P_Y = 55.40762096549393
H5_P_Z = 9.618452955034497
# Orientation:
H5_DX_X = -0.37629603081441587
H5_DX_Y = 0.5418649623571312
H5_DX_Z = 0.7515208977553716
H5_DY_X = 0.30406185137286457
H5_DY_Y = -0.6939885104613523
H5_DY_Z = 0.6526303225313175
H5_DZ_X = 0.8751843735653893
H5_DZ_Y = 0.474091035474558
H5_DZ_Z = 0.09638465826900244
#############  END of Description of junction: j1