############# Start of Description of junction: j9 # Number of strands: NUM_STRANDS = 2 LILLEY = HS3HS5 FINGERPRINT = 65 LOOP_LENGTH_SUM = 8 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 276 S1_NAME_ID3 = 286 S1_NUM_ID5_ORIG = 276 S1_NUM_ID3_ORIG = 286 S1_NAME2_ID5 = 278 S1_NAME2_ID3 = 284 S1_NUM2_ID5_ORIG = 278 S1_NUM2_ID3_ORIG = 284 S1_SQ2 = GACGACG S1_SQLEN2 = 7 S1_SQ = GCGACGACGGG S1_SQLEN = 11 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 240 S2_NAME_ID3 = 248 S2_NUM_ID5_ORIG = 240 S2_NUM_ID3_ORIG = 248 S2_NAME2_ID5 = 242 S2_NAME2_ID3 = 246 S2_NUM2_ID5_ORIG = 242 S2_NUM2_ID3_ORIG = 246 S2_SQ2 = CAUCA S2_SQLEN2 = 5 S2_SQ = CCCAUCAGC S2_SQLEN = 9 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 9 H1_INID2 = 3 H1_OUTID2 = 7 H1_INID2_ORIG = 278 H1_OUTID2_ORIG = 246 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 140.2556704486341 H1_P_Y = 71.57746531784552 H1_P_Z = -43.66120601513153 # Orientation: H1_DX_X = 0.3110788417293122 H1_DX_Y = -0.17198690458563703 H1_DX_Z = 0.9346927082626593 H1_DY_X = -0.9400817616736674 H1_DY_Y = -0.2001029166244308 H1_DY_Z = 0.27605271983249935 H1_DZ_X = 0.13955728428450698 H1_DZ_Y = -0.9645617281488228 H1_DZ_Z = -0.2239295357778488 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 11 H2_INID2 = 3 H2_OUTID2 = 9 H2_INID2_ORIG = 242 H2_OUTID2_ORIG = 284 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 141.92545307381496 H2_P_Y = 73.31190022730952 H2_P_Z = -19.218522133342177 # Orientation: H2_DX_X = 0.9818955275209191 H2_DX_Y = -0.16004545752089427 H2_DX_Z = 0.10132435324907263 H2_DY_X = 0.05484350121756165 H2_DY_Y = 0.7521959709768566 H2_DY_Z = 0.6566531897587815 H2_DZ_X = -0.18131013046328803 H2_DZ_Y = -0.6392078478657055 H2_DZ_Z = 0.7473553129658441 ############# END of Description of junction: j9