############# Start of Description of junction: j45 # Number of strands: NUM_STRANDS = 5 LILLEY = HS7HS8HS8HS9HS11 FINGERPRINT = 19:26:29:47:109:127:133:151:157:171 LOOP_LENGTH_SUM = 43 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2479 S1_NAME_ID3 = 2492 S1_NUM_ID5_ORIG = 2479 S1_NUM_ID3_ORIG = 2492 S1_NAME2_ID5 = 2481 S1_NAME2_ID3 = 2490 S1_NUM2_ID5_ORIG = 2481 S1_NUM2_ID3_ORIG = 2490 S1_SQ2 = GGAUAACAGA S1_SQLEN2 = 10 S1_SQ = AGGGAUAACAGAGU S1_SQLEN = 14 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 2093 S2_NAME_ID3 = 2107 S2_NUM_ID5_ORIG = 2093 S2_NUM_ID3_ORIG = 2107 S2_NAME2_ID5 = 2095 S2_NAME2_ID3 = 2105 S2_NUM2_ID5_ORIG = 2095 S2_NUM2_ID3_ORIG = 2105 S2_SQ2 = AAGCGAAGACC S2_SQLEN2 = 11 S2_SQ = GGAAGCGAAGACCCU S2_SQLEN = 15 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 2529 S3_NAME_ID3 = 2545 S3_NUM_ID5_ORIG = 2529 S3_NUM_ID3_ORIG = 2545 S3_NAME2_ID5 = 2531 S3_NAME2_ID3 = 2543 S3_NUM2_ID5_ORIG = 2531 S3_NUM2_ID3_ORIG = 2543 S3_SQ2 = UACCUCGAUGUCG S3_SQLEN2 = 13 S3_SQ = GCUACCUCGAUGUCGGU S3_SQLEN = 17 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 2613 S4_NAME_ID3 = 2625 S4_NUM_ID5_ORIG = 2613 S4_NUM_ID3_ORIG = 2625 S4_NAME2_ID5 = 2615 S4_NAME2_ID3 = 2623 S4_NUM2_ID5_ORIG = 2615 S4_NUM2_ID3_ORIG = 2623 S4_SQ2 = UGGGUUUAG S4_SQLEN2 = 9 S4_SQ = GCUGGGUUUAGAC S4_SQLEN = 13 S4_CHAR = A ## Properties of strand 5 S5_NAME_ID5 = 2639 S5_NAME_ID3 = 2652 S5_NUM_ID5_ORIG = 2639 S5_NUM_ID3_ORIG = 2652 S5_NAME2_ID5 = 2641 S5_NAME2_ID3 = 2650 S5_NUM2_ID5_ORIG = 2641 S5_NUM2_ID3_ORIG = 2650 S5_SQ2 = CGGCUGCUAU S5_SQLEN2 = 10 S5_SQ = GUCGGCUGCUAUCU S5_SQLEN = 14 S5_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 15 H1_INID2 = 3 H1_OUTID2 = 13 H1_INID2_ORIG = 2481 H1_OUTID2_ORIG = 2105 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 71.55925993420192 H1_P_Y = 113.76164059593896 H1_P_Z = 83.24875352850593 # Orientation: H1_DX_X = -0.39356710263717787 H1_DX_Y = -0.8843585132623843 H1_DX_Z = 0.2510277987437348 H1_DY_X = -0.6683258278131206 H1_DY_Y = 0.087750795771953 H1_DY_Z = -0.7386747496153419 H1_DZ_X = 0.6312254142536347 H1_DZ_Y = -0.4584864423968895 H1_DZ_Z = -0.6255754619057399 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 14 H2_INID2 = 3 H2_OUTID2 = 12 H2_INID2_ORIG = 2531 H2_OUTID2_ORIG = 2490 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 63.879948088050206 H2_P_Y = 108.93545143347485 H2_P_Z = 115.80101471309835 # Orientation: H2_DX_X = -0.5889166346389132 H2_DX_Y = -0.7998553154167496 H2_DX_Z = -0.11579581963589192 H2_DY_X = 0.8071335133252475 H2_DY_Y = -0.5894126113368401 H2_DY_Z = -0.033589660080821204 H2_DZ_X = -0.04138464827478572 H2_DZ_Y = -0.1132441963045494 H2_DZ_Z = 0.9927049223664142 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 17 H3_INID2 = 3 H3_OUTID2 = 15 H3_INID2_ORIG = 2615 H3_OUTID2_ORIG = 2543 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 64.915561128469 H3_P_Y = 131.27047258917813 H3_P_Z = 114.47120773839531 # Orientation: H3_DX_X = 0.7474479733741504 H3_DX_Y = 0.5386676881550443 H3_DX_Z = 0.3887912664098394 H3_DY_X = -0.447602132810772 H3_DY_Y = 0.8408163964005269 H3_DY_Z = -0.30443409508023933 H3_DZ_X = -0.49089088176714313 H3_DZ_Y = 0.05352484733046481 H3_DZ_Z = 0.8695753175637577 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 13 H4_INID2 = 3 H4_OUTID2 = 11 H4_INID2_ORIG = 2641 H4_OUTID2_ORIG = 2623 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 91.58228774020327 H4_P_Y = 119.95317339925653 H4_P_Z = 94.56433984720985 # Orientation: H4_DX_X = 0.7058727163504273 H4_DX_Y = 0.7026015293506447 H4_DX_Z = -0.08997110239525341 H4_DY_X = 0.33241140076263775 H4_DY_Y = -0.21640904083953671 H4_DY_Z = 0.9179704721209418 H4_DZ_X = 0.6254968976382713 H4_DZ_Y = -0.6778777308608426 H4_DZ_Z = -0.38630999604960436 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 14 H5_INID2 = 3 H5_OUTID2 = 12 H5_INID2_ORIG = 2095 H5_OUTID2_ORIG = 2650 H5_INSEQ_CHAR = A H5_OUTSEQ_CHAR = A # Position: H5_P_X = 48.81177344788801 H5_P_Y = 141.28133612770262 H5_P_Z = 107.68262946059666 # Orientation: H5_DX_X = -0.7451323889094041 H5_DX_Y = -0.6602709001220433 H5_DX_Z = -0.09391518221347894 H5_DY_X = 0.4269229691232965 H5_DY_Y = -0.5804248556493974 H5_DY_Z = 0.6934289908702453 H5_DZ_X = -0.5123616900521597 H5_DZ_Y = 0.47660185206984806 H5_DZ_Z = 0.7143781723782467 ############# END of Description of junction: j45