############# Start of Description of junction: j2 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS4 FINGERPRINT = 89 LOOP_LENGTH_SUM = 5 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 279 S1_NAME_ID3 = 288 S1_NUM_ID5_ORIG = 279 S1_NUM_ID3_ORIG = 288 S1_NAME2_ID5 = 281 S1_NAME2_ID3 = 286 S1_NUM2_ID5_ORIG = 281 S1_NUM2_ID3_ORIG = 286 S1_SQ2 = UCUCAU S1_SQLEN2 = 6 S1_SQ = CCUCUCAUCA S1_SQLEN = 10 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 364 S2_NAME_ID3 = 370 S2_NUM_ID5_ORIG = 364 S2_NUM_ID3_ORIG = 370 S2_NAME2_ID5 = 366 S2_NAME2_ID3 = 368 S2_NUM2_ID5_ORIG = 366 S2_NUM2_ID3_ORIG = 368 S2_SQ2 = UGC S2_SQLEN2 = 3 S2_SQ = CGUGCGG S2_SQLEN = 7 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 281 H1_OUTID2_ORIG = 368 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 79.5934199554606 H1_P_Y = 98.10469752882854 H1_P_Z = -9.001192573481621 # Orientation: H1_DX_X = -0.8264838584583316 H1_DX_Y = -0.5246179374544795 H1_DX_Z = 0.20420688384291275 H1_DY_X = 0.28512971634853557 H1_DY_Y = -0.7028600090498713 H1_DY_Z = -0.6516815576133901 H1_DZ_X = 0.4854126868581403 H1_DZ_Y = -0.48037883735591436 H1_DZ_Z = 0.7304866159333407 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 10 H2_INID2 = 3 H2_OUTID2 = 8 H2_INID2_ORIG = 366 H2_OUTID2_ORIG = 286 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 61.61127658026809 H2_P_Y = 116.20895663813124 H2_P_Z = -0.628838016273189 # Orientation: H2_DX_X = 0.9546889583840255 H2_DX_Y = 0.24489248592576018 H2_DX_Z = 0.1691054791446066 H2_DY_X = -0.04707483684963876 H2_DY_Y = 0.6853305539330705 H2_DY_Z = -0.7267090143801611 H2_DZ_X = -0.29385872877149666 H2_DZ_Y = 0.6858204591457593 H2_DZ_Z = 0.6658057865037588 ############# END of Description of junction: j2