############# Start of Description of junction: j1 # Number of strands: NUM_STRANDS = 2 LILLEY = HS3HS19 FINGERPRINT = 131 LOOP_LENGTH_SUM = 22 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 53 S1_NAME_ID3 = 77 S1_NUM_ID5_ORIG = 53 S1_NUM_ID3_ORIG = 77 S1_NAME2_ID5 = 55 S1_NAME2_ID3 = 75 S1_NUM2_ID5_ORIG = 55 S1_NUM2_ID3_ORIG = 75 S1_SQ2 = ACGCGAUUACCUGCGAAAAGC S1_SQLEN2 = 21 S1_SQ = GGACGCGAUUACCUGCGAAAAGCCC S1_SQLEN = 25 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 106 S2_NAME_ID3 = 114 S2_NUM_ID5_ORIG = 106 S2_NUM_ID3_ORIG = 114 S2_NAME2_ID5 = 108 S2_NAME2_ID3 = 112 S2_NUM2_ID5_ORIG = 108 S2_NUM2_ID3_ORIG = 112 S2_SQ2 = GAUGU S2_SQLEN2 = 5 S2_SQ = GGGAUGUCC S2_SQLEN = 9 S2_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 9 H1_INID2 = 3 H1_OUTID2 = 7 H1_INID2_ORIG = 55 H1_OUTID2_ORIG = 112 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 2.4567926677808813 H1_P_Y = 169.72110869208944 H1_P_Z = 121.47912163631983 # Orientation: H1_DX_X = 0.6744804459008478 H1_DX_Y = -0.07107874654352031 H1_DX_Z = 0.7348632116844556 H1_DY_X = 0.5348882002529662 H1_DY_Y = -0.639034733985028 H1_DY_Z = -0.5527469782738024 H1_DZ_X = 0.5088916793655978 H1_DZ_Y = 0.7658866891064804 H1_DZ_Z = -0.3929972495094489 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 25 H2_INID2 = 3 H2_OUTID2 = 23 H2_INID2_ORIG = 108 H2_OUTID2_ORIG = 75 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = -23.069363794505044 H2_P_Y = 163.47941452971557 H2_P_Z = 116.51974336784555 # Orientation: H2_DX_X = -0.37962354960976796 H2_DX_Y = 0.8919514713269336 H2_DX_Z = 0.24557795784519953 H2_DY_X = 0.09104339868872557 H2_DY_Y = 0.30017930556468286 H2_DY_Z = -0.9495280322696829 H2_DZ_X = -0.9206503462970481 H2_DZ_Y = -0.33810495013892705 H2_DZ_Z = -0.1951614269128754 ############# END of Description of junction: j1