############# Start of Description of junction: j1 # Number of strands: NUM_STRANDS = 2 LILLEY = HS3HS19 FINGERPRINT = 132 LOOP_LENGTH_SUM = 22 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 53 S1_NAME_ID3 = 77 S1_NUM_ID5_ORIG = 53 S1_NUM_ID3_ORIG = 77 S1_NAME2_ID5 = 55 S1_NAME2_ID3 = 75 S1_NUM2_ID5_ORIG = 55 S1_NUM2_ID3_ORIG = 75 S1_SQ2 = ACGCGAUUACCUGCGAAAAGC S1_SQLEN2 = 21 S1_SQ = GGACGCGAUUACCUGCGAAAAGCCC S1_SQLEN = 25 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 106 S2_NAME_ID3 = 114 S2_NUM_ID5_ORIG = 106 S2_NUM_ID3_ORIG = 114 S2_NAME2_ID5 = 108 S2_NAME2_ID3 = 112 S2_NUM2_ID5_ORIG = 108 S2_NUM2_ID3_ORIG = 112 S2_SQ2 = GAUGU S2_SQLEN2 = 5 S2_SQ = GGGAUGUCC S2_SQLEN = 9 S2_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 9 H1_INID2 = 3 H1_OUTID2 = 7 H1_INID2_ORIG = 55 H1_OUTID2_ORIG = 112 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 2.3988483977139765 H1_P_Y = 169.88397929859954 H1_P_Z = 121.58355468153205 # Orientation: H1_DX_X = 0.6697174193065472 H1_DX_Y = -0.10161310239257659 H1_DX_Z = 0.7356312634054802 H1_DY_X = 0.5378274441139204 H1_DY_Y = -0.616701541915404 H1_DY_Z = -0.5748224495938246 H1_DZ_X = 0.5120744268514787 H1_DZ_Y = 0.7806112897090998 H1_DZ_Z = -0.358365449985655 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 25 H2_INID2 = 3 H2_OUTID2 = 23 H2_INID2_ORIG = 108 H2_OUTID2_ORIG = 75 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = -23.11425405961613 H2_P_Y = 163.44530796803105 H2_P_Z = 116.50748584685137 # Orientation: H2_DX_X = -0.3790096571666517 H2_DX_Y = 0.8921485373529947 H2_DX_Z = 0.24581022572978384 H2_DY_X = 0.0919294752882358 H2_DY_Y = 0.30061268269608377 H2_DY_Z = -0.9493055285710028 H2_DZ_X = -0.9208152102065092 H2_DZ_Y = -0.3371987578582889 H2_DZ_Z = -0.1959498567266138 ############# END of Description of junction: j1