############# Start of Description of junction: j3 # Number of strands: NUM_STRANDS = 5 LILLEY = 2HS1HS1HS3HS5 FINGERPRINT = 30:75:79:82:99:104:122:151:157:173 LOOP_LENGTH_SUM = 10 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 114 S1_NAME_ID3 = 120 S1_NUM_ID5_ORIG = 114 S1_NUM_ID3_ORIG = 120 S1_NAME2_ID5 = 115 S1_NAME2_ID3 = 119 S1_NUM2_ID5_ORIG = 115 S1_NUM2_ID3_ORIG = 119 S1_SQ2 = GAAUG S1_SQLEN2 = 5 S1_SQ = CGAAUGG S1_SQLEN = 7 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 45 S2_NAME_ID3 = 53 S2_NUM_ID5_ORIG = 45 S2_NUM_ID3_ORIG = 53 S2_NAME2_ID5 = 46 S2_NAME2_ID3 = 52 S2_NUM2_ID5_ORIG = 46 S2_NUM2_ID3_ORIG = 52 S2_SQ2 = CGAUGAA S2_SQLEN2 = 7 S2_SQ = CCGAUGAAG S2_SQLEN = 9 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 127 S3_NAME_ID3 = 130 S3_NUM_ID5_ORIG = 127 S3_NUM_ID3_ORIG = 130 S3_NAME2_ID5 = 128 S3_NAME2_ID3 = 129 S3_NUM2_ID5_ORIG = 128 S3_NUM2_ID3_ORIG = 129 S3_SQ2 = CA S3_SQLEN2 = 2 S3_SQ = CCAC S3_SQLEN = 4 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 141 S4_NAME_ID3 = 145 S4_NUM_ID5_ORIG = 141 S4_NUM_ID3_ORIG = 145 S4_NAME2_ID5 = 142 S4_NAME2_ID3 = 144 S4_NUM2_ID5_ORIG = 142 S4_NUM2_ID3_ORIG = 144 S4_SQ2 = UAU S4_SQLEN2 = 3 S4_SQ = GUAUC S4_SQLEN = 5 S4_CHAR = 0 ## Properties of strand 5 S5_NAME_ID5 = 152 S5_NAME_ID3 = 156 S5_NUM_ID5_ORIG = 152 S5_NUM_ID3_ORIG = 156 S5_NAME2_ID5 = 153 S5_NAME2_ID3 = 155 S5_NUM2_ID5_ORIG = 153 S5_NUM2_ID3_ORIG = 155 S5_SQ2 = AUG S5_SQLEN2 = 3 S5_SQ = GAUGG S5_SQLEN = 5 S5_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 9 H1_INID2 = 2 H1_OUTID2 = 8 H1_INID2_ORIG = 115 H1_OUTID2_ORIG = 52 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 0.3419464639104559 H1_P_Y = 166.33872503751152 H1_P_Z = 123.34962719736939 # Orientation: H1_DX_X = 0.517143145414488 H1_DX_Y = -0.6126885345072992 H1_DX_Z = -0.5976418047912233 H1_DY_X = 0.7100135277653676 H1_DY_Y = -0.08283450115717983 H1_DY_Z = 0.6992991032514055 H1_DZ_X = -0.47795790352392764 H1_DZ_Y = -0.7859715040008268 H1_DZ_Z = 0.392179853329651 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 7 H2_INID2 = 2 H2_OUTID2 = 6 H2_INID2_ORIG = 128 H2_OUTID2_ORIG = 119 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 9.396214204131578 H2_P_Y = 173.37201283328716 H2_P_Z = 131.08568993195095 # Orientation: H2_DX_X = 0.5653149306346936 H2_DX_Y = 0.8243496702059758 H2_DX_Z = 0.029438927168001783 H2_DY_X = 0.5228266606608969 H2_DY_Y = -0.3856871407960796 H2_DY_Z = 0.7601958381408735 H2_DZ_X = 0.6380214041109227 H2_DZ_Y = -0.4143586015227072 H2_DZ_Z = -0.6490266845365227 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 4 H3_INID2 = 2 H3_OUTID2 = 3 H3_INID2_ORIG = 142 H3_OUTID2_ORIG = 129 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 1.209709411107906 H3_P_Y = 182.7554850185239 H3_P_Z = 136.9011717507245 # Orientation: H3_DX_X = 0.8115926833848599 H3_DX_Y = 0.516597708564035 H3_DX_Z = 0.27284450476884103 H3_DY_X = -0.21440897700611272 H3_DY_Y = 0.697808126942391 H3_DY_Z = -0.6834417374965938 H3_DZ_X = -0.5434575483470265 H3_DZ_Y = 0.49617600252284433 H3_DZ_Z = 0.6770991564498559 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 5 H4_INID2 = 2 H4_OUTID2 = 4 H4_INID2_ORIG = 153 H4_OUTID2_ORIG = 144 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 8.704519712826656 H4_P_Y = 191.18361484549365 H4_P_Z = 116.55663809255529 # Orientation: H4_DX_X = 0.9444273168078148 H4_DX_Y = -0.2555534662490402 H4_DX_Z = -0.20675944755993214 H4_DY_X = -0.234204239886866 H4_DY_Y = -0.0817515615727018 H4_DY_Z = -0.9687440612460136 H4_DZ_X = 0.23066299505165766 H4_DZ_Y = 0.9633322936912805 H4_DZ_Z = -0.1370601132542788 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 5 H5_INID2 = 2 H5_OUTID2 = 4 H5_INID2_ORIG = 46 H5_OUTID2_ORIG = 155 H5_INSEQ_CHAR = 0 H5_OUTSEQ_CHAR = 0 # Position: H5_P_X = 10.978139181204497 H5_P_Y = 171.34916430987084 H5_P_Z = 103.74034862214252 # Orientation: H5_DX_X = -0.009909146270485891 H5_DX_Y = -0.3173596171878046 H5_DX_Z = 0.9482534904753095 H5_DY_X = -0.7780341521035936 H5_DY_Y = -0.5932510952722225 H5_DY_Z = -0.20667848489566154 H5_DZ_X = 0.628143826667614 H5_DZ_Y = -0.739821607779021 H5_DZ_Z = -0.24103800879244375 ############# END of Description of junction: j3