############# Start of Description of junction: j3 # Number of strands: NUM_STRANDS = 5 LILLEY = 2HS1HS1HS3HS5 FINGERPRINT = 30:73:82:83:98:106:121:151:156:170 LOOP_LENGTH_SUM = 10 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 114 S1_NAME_ID3 = 120 S1_NUM_ID5_ORIG = 114 S1_NUM_ID3_ORIG = 120 S1_NAME2_ID5 = 115 S1_NAME2_ID3 = 119 S1_NUM2_ID5_ORIG = 115 S1_NUM2_ID3_ORIG = 119 S1_SQ2 = GAAUG S1_SQLEN2 = 5 S1_SQ = CGAAUGG S1_SQLEN = 7 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 45 S2_NAME_ID3 = 53 S2_NUM_ID5_ORIG = 45 S2_NUM_ID3_ORIG = 53 S2_NAME2_ID5 = 46 S2_NAME2_ID3 = 52 S2_NUM2_ID5_ORIG = 46 S2_NUM2_ID3_ORIG = 52 S2_SQ2 = CGAUGAA S2_SQLEN2 = 7 S2_SQ = CCGAUGAAG S2_SQLEN = 9 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 127 S3_NAME_ID3 = 130 S3_NUM_ID5_ORIG = 127 S3_NUM_ID3_ORIG = 130 S3_NAME2_ID5 = 128 S3_NAME2_ID3 = 129 S3_NUM2_ID5_ORIG = 128 S3_NUM2_ID3_ORIG = 129 S3_SQ2 = CA S3_SQLEN2 = 2 S3_SQ = CCAC S3_SQLEN = 4 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 141 S4_NAME_ID3 = 145 S4_NUM_ID5_ORIG = 141 S4_NUM_ID3_ORIG = 145 S4_NAME2_ID5 = 142 S4_NAME2_ID3 = 144 S4_NUM2_ID5_ORIG = 142 S4_NUM2_ID3_ORIG = 144 S4_SQ2 = UAU S4_SQLEN2 = 3 S4_SQ = GUAUC S4_SQLEN = 5 S4_CHAR = 0 ## Properties of strand 5 S5_NAME_ID5 = 152 S5_NAME_ID3 = 156 S5_NUM_ID5_ORIG = 152 S5_NUM_ID3_ORIG = 156 S5_NAME2_ID5 = 153 S5_NAME2_ID3 = 155 S5_NUM2_ID5_ORIG = 153 S5_NUM2_ID3_ORIG = 155 S5_SQ2 = AUG S5_SQLEN2 = 3 S5_SQ = GAUGG S5_SQLEN = 5 S5_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 9 H1_INID2 = 2 H1_OUTID2 = 8 H1_INID2_ORIG = 115 H1_OUTID2_ORIG = 52 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 0.2935863751942307 H1_P_Y = 166.52482919505417 H1_P_Z = 123.04153885797032 # Orientation: H1_DX_X = 0.5086881345584583 H1_DX_Y = -0.6255230777967995 H1_DX_Z = -0.5915718560775787 H1_DY_X = 0.6989878546676449 H1_DY_Y = -0.10109540702214304 H1_DY_Z = 0.7079517622734954 H1_DZ_X = -0.5026453628419929 H1_DZ_Y = -0.7736282038696913 H1_DZ_Z = 0.38580700018374614 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 7 H2_INID2 = 2 H2_OUTID2 = 6 H2_INID2_ORIG = 128 H2_OUTID2_ORIG = 119 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 9.504724114272262 H2_P_Y = 173.2555172319627 H2_P_Z = 131.14113506675827 # Orientation: H2_DX_X = 0.5429841071961619 H2_DX_Y = 0.8390213918076768 H2_DX_Z = 0.0348046465504126 H2_DY_X = 0.5250644564581481 H2_DY_Y = -0.371564368438527 H2_DY_Z = 0.7656678370358918 H2_DZ_X = 0.6553438608064486 H2_DZ_Y = -0.3974707840785072 H2_DZ_Z = -0.6422938579087543 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 4 H3_INID2 = 2 H3_OUTID2 = 3 H3_INID2_ORIG = 142 H3_OUTID2_ORIG = 129 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 1.211393387372798 H3_P_Y = 182.78983898316915 H3_P_Z = 136.96978228553792 # Orientation: H3_DX_X = 0.8264362628997777 H3_DX_Y = 0.5007927594291175 H3_DX_Z = 0.2573124860313385 H3_DY_X = -0.2045278906323027 H3_DY_Y = 0.6928212737517754 H3_DY_Z = -0.691496221674754 H3_DZ_X = -0.5245678653117722 H3_DZ_Y = 0.5188499732488765 H3_DZ_Z = 0.6749987110668485 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 5 H4_INID2 = 2 H4_OUTID2 = 4 H4_INID2_ORIG = 153 H4_OUTID2_ORIG = 144 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 8.709542218883279 H4_P_Y = 191.15370323863755 H4_P_Z = 116.56398906737311 # Orientation: H4_DX_X = 0.9441982071929527 H4_DX_Y = -0.2557819967892385 H4_DX_Z = -0.20752184379510652 H4_DY_X = -0.2347540796946994 H4_DY_Y = -0.08064357038750813 H4_DY_Z = -0.9687038436084805 H4_DZ_X = 0.2310417009985546 H4_DZ_Y = 0.9633650318927209 H4_DZ_Z = -0.13618938184026774 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 5 H5_INID2 = 2 H5_OUTID2 = 4 H5_INID2_ORIG = 46 H5_OUTID2_ORIG = 155 H5_INSEQ_CHAR = 0 H5_OUTSEQ_CHAR = 0 # Position: H5_P_X = 10.845068414407773 H5_P_Y = 171.4396536975206 H5_P_Z = 103.67167087578561 # Orientation: H5_DX_X = -0.008074060266128669 H5_DX_Y = -0.3257627812760404 H5_DX_Z = 0.945417061347058 H5_DY_X = -0.7628980366145299 H5_DY_Y = -0.6092153762316741 H5_DY_Z = -0.21643292515830126 H5_DZ_X = 0.6464684023836842 H5_DZ_Y = -0.72300431236485 H5_DZ_Z = -0.24360494457484094 ############# END of Description of junction: j3