############# Start of Description of junction: j3 # Number of strands: NUM_STRANDS = 5 LILLEY = 2HS1HS1HS3HS5 FINGERPRINT = 31:75:80:82:98:106:122:151:156:171 LOOP_LENGTH_SUM = 10 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 114 S1_NAME_ID3 = 120 S1_NUM_ID5_ORIG = 114 S1_NUM_ID3_ORIG = 120 S1_NAME2_ID5 = 115 S1_NAME2_ID3 = 119 S1_NUM2_ID5_ORIG = 115 S1_NUM2_ID3_ORIG = 119 S1_SQ2 = GAAUG S1_SQLEN2 = 5 S1_SQ = CGAAUGG S1_SQLEN = 7 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 45 S2_NAME_ID3 = 53 S2_NUM_ID5_ORIG = 45 S2_NUM_ID3_ORIG = 53 S2_NAME2_ID5 = 46 S2_NAME2_ID3 = 52 S2_NUM2_ID5_ORIG = 46 S2_NUM2_ID3_ORIG = 52 S2_SQ2 = CGAUGAA S2_SQLEN2 = 7 S2_SQ = CCGAUGAAG S2_SQLEN = 9 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 127 S3_NAME_ID3 = 130 S3_NUM_ID5_ORIG = 127 S3_NUM_ID3_ORIG = 130 S3_NAME2_ID5 = 128 S3_NAME2_ID3 = 129 S3_NUM2_ID5_ORIG = 128 S3_NUM2_ID3_ORIG = 129 S3_SQ2 = CA S3_SQLEN2 = 2 S3_SQ = CCAC S3_SQLEN = 4 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 141 S4_NAME_ID3 = 145 S4_NUM_ID5_ORIG = 141 S4_NUM_ID3_ORIG = 145 S4_NAME2_ID5 = 142 S4_NAME2_ID3 = 144 S4_NUM2_ID5_ORIG = 142 S4_NUM2_ID3_ORIG = 144 S4_SQ2 = UAU S4_SQLEN2 = 3 S4_SQ = GUAUC S4_SQLEN = 5 S4_CHAR = 0 ## Properties of strand 5 S5_NAME_ID5 = 152 S5_NAME_ID3 = 156 S5_NUM_ID5_ORIG = 152 S5_NUM_ID3_ORIG = 156 S5_NAME2_ID5 = 153 S5_NAME2_ID3 = 155 S5_NUM2_ID5_ORIG = 153 S5_NUM2_ID3_ORIG = 155 S5_SQ2 = AUG S5_SQLEN2 = 3 S5_SQ = GAUGG S5_SQLEN = 5 S5_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 9 H1_INID2 = 2 H1_OUTID2 = 8 H1_INID2_ORIG = 115 H1_OUTID2_ORIG = 52 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 0.29767445027152295 H1_P_Y = 166.52463545834257 H1_P_Z = 123.04374632317527 # Orientation: H1_DX_X = 0.5101800112683703 H1_DX_Y = -0.624337622113103 H1_DX_Z = -0.5915394236366325 H1_DY_X = 0.6992530919177782 H1_DY_Y = -0.099349587194979 H1_DY_Z = 0.7079369837546494 H1_DZ_X = -0.5007608905911429 H1_DZ_Y = -0.7748110693184174 H1_DZ_Z = 0.38588383914854774 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 7 H2_INID2 = 2 H2_OUTID2 = 6 H2_INID2_ORIG = 128 H2_OUTID2_ORIG = 119 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 9.503743254954149 H2_P_Y = 173.25548683976345 H2_P_Z = 131.13817340474085 # Orientation: H2_DX_X = 0.5429986509985838 H2_DX_Y = 0.8390114376123847 H2_DX_Z = 0.034817704825456985 H2_DY_X = 0.5250405674003709 H2_DY_Y = -0.3715748041463769 H2_DY_Z = 0.7656791544162047 H2_DZ_X = 0.6553509499478913 H2_DZ_Y = -0.39748204044860813 H2_DZ_Z = -0.6422796586559514 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 4 H3_INID2 = 2 H3_OUTID2 = 3 H3_INID2_ORIG = 142 H3_OUTID2_ORIG = 129 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 1.3062120756482987 H3_P_Y = 182.83458861590515 H3_P_Z = 136.81123222556198 # Orientation: H3_DX_X = 0.8165827671914458 H3_DX_Y = 0.5095246044546684 H3_DX_Z = 0.27125128899467654 H3_DY_X = -0.21003404244829937 H3_DY_Y = 0.6999844470826133 H3_DY_Z = -0.6825741533747589 H3_DZ_X = -0.5376600090566459 H3_DZ_Y = 0.5004062862292642 H3_DZ_Z = 0.6786127491901652 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 5 H4_INID2 = 2 H4_OUTID2 = 4 H4_INID2_ORIG = 153 H4_OUTID2_ORIG = 144 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 8.708240146214727 H4_P_Y = 191.16367675689023 H4_P_Z = 116.56229007407686 # Orientation: H4_DX_X = 0.9442665400724657 H4_DX_Y = -0.2557147739151162 H4_DX_Z = -0.20729364607031187 H4_DY_X = -0.2345892548760009 H4_DY_Y = -0.08097324931887329 H4_DY_Z = -0.9687162713568256 H4_DZ_X = 0.2309298222324241 H4_DZ_Y = 0.963355223838164 H4_DZ_Z = -0.13644826824628353 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 5 H5_INID2 = 2 H5_OUTID2 = 4 H5_INID2_ORIG = 46 H5_OUTID2_ORIG = 155 H5_INSEQ_CHAR = 0 H5_OUTSEQ_CHAR = 0 # Position: H5_P_X = 10.989454932237752 H5_P_Y = 171.33837992519966 H5_P_Z = 103.73350980861495 # Orientation: H5_DX_X = -0.00988970398836031 H5_DX_Y = -0.31730808888281103 H5_DX_Z = 0.9482709372771865 H5_DY_X = -0.7779399698921825 H5_DY_Y = -0.5933782264853278 H5_DY_Z = -0.20666805166084146 H5_DZ_X = 0.6282607714947446 H5_DZ_Y = -0.7397417502498342 H5_DZ_Z = -0.24097831009895287 ############# END of Description of junction: j3