############# Start of Description of junction: j3 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS3 FINGERPRINT = 141 LOOP_LENGTH_SUM = 4 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 21 S1_NAME_ID3 = 29 S1_NUM_ID5_ORIG = 21 S1_NUM_ID3_ORIG = 29 S1_NAME2_ID5 = 23 S1_NAME2_ID3 = 27 S1_NUM2_ID5_ORIG = 23 S1_NUM2_ID3_ORIG = 27 S1_SQ2 = CGAGC S1_SQLEN2 = 5 S1_SQ = ACCGAGCCA S1_SQLEN = 9 S1_CHAR = E ## Properties of strand 2 S2_NAME_ID5 = 41 S2_NAME_ID3 = 47 S2_NUM_ID5_ORIG = 41 S2_NUM_ID3_ORIG = 47 S2_NAME2_ID5 = 43 S2_NAME2_ID3 = 45 S2_NUM2_ID5_ORIG = 43 S2_NUM2_ID3_ORIG = 45 S2_SQ2 = GGA S2_SQLEN2 = 3 S2_SQ = UGGGAGU S2_SQLEN = 7 S2_CHAR = F ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 23 H1_OUTID2_ORIG = 45 H1_INSEQ_CHAR = E H1_OUTSEQ_CHAR = F # Position: H1_P_X = -6.145997923669304 H1_P_Y = 19.35710508797379 H1_P_Z = 21.01000091458005 # Orientation: H1_DX_X = 0.6782283149297141 H1_DX_Y = 0.29592693484135424 H1_DX_Z = 0.6726318473451869 H1_DY_X = -0.41339185366044084 H1_DY_Y = 0.9104074226012386 H1_DY_Z = 0.016294176866360033 H1_DZ_X = -0.6075471406852184 H1_DZ_Y = -0.28911169832431227 H1_DZ_Z = 0.739797876272462 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 43 H2_OUTID2_ORIG = 27 H2_INSEQ_CHAR = F H2_OUTSEQ_CHAR = E # Position: H2_P_X = 9.841204000218825 H2_P_Y = 18.404067667331223 H2_P_Z = 4.7150513852004305 # Orientation: H2_DX_X = -0.5860088335500073 H2_DX_Y = -0.8103017742483942 H2_DX_Z = -0.0021637123794606694 H2_DY_X = -0.6346872922381674 H2_DY_Y = 0.4606615157253806 H2_DY_Z = -0.6204538733870368 H2_DZ_X = 0.503751613469122 H2_DZ_Y = -0.3622181698638194 H2_DZ_Z = -0.7842399564851057 ############# END of Description of junction: j3