############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS3 FINGERPRINT = 148 LOOP_LENGTH_SUM = 4 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 21 S1_NAME_ID3 = 29 S1_NUM_ID5_ORIG = 21 S1_NUM_ID3_ORIG = 29 S1_NAME2_ID5 = 23 S1_NAME2_ID3 = 27 S1_NUM2_ID5_ORIG = 23 S1_NUM2_ID3_ORIG = 27 S1_SQ2 = CGAGC S1_SQLEN2 = 5 S1_SQ = ACCGAGCCA S1_SQLEN = 9 S1_CHAR = G ## Properties of strand 2 S2_NAME_ID5 = 41 S2_NAME_ID3 = 47 S2_NUM_ID5_ORIG = 41 S2_NUM_ID3_ORIG = 47 S2_NAME2_ID5 = 43 S2_NAME2_ID3 = 45 S2_NUM2_ID5_ORIG = 43 S2_NUM2_ID3_ORIG = 45 S2_SQ2 = GGA S2_SQLEN2 = 3 S2_SQ = UGGGAGU S2_SQLEN = 7 S2_CHAR = H ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 23 H1_OUTID2_ORIG = 45 H1_INSEQ_CHAR = G H1_OUTSEQ_CHAR = H # Position: H1_P_X = 38.41181101191007 H1_P_Y = 32.68178343589636 H1_P_Z = 21.87893441071733 # Orientation: H1_DX_X = -0.8112961865736708 H1_DX_Y = -0.15990641600922828 H1_DX_Z = 0.562341920694255 H1_DY_X = 0.3001870324472904 H1_DY_Y = -0.9393292183571695 H1_DY_Z = 0.1659770016930011 H1_DZ_X = 0.5016834093345182 H1_DZ_Y = 0.3034642609263827 H1_DZ_Z = 0.8100760452814946 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 43 H2_OUTID2_ORIG = 27 H2_INSEQ_CHAR = H H2_OUTSEQ_CHAR = G # Position: H2_P_X = 21.26058808983736 H2_P_Y = 33.7552579329584 H2_P_Z = 5.952859458874856 # Orientation: H2_DX_X = 0.6452745595981568 H2_DX_Y = 0.7226892459499936 H2_DX_Z = -0.2476711459246559 H2_DY_X = 0.5110271452766284 H2_DY_Y = -0.6493135936699233 H2_DY_Z = -0.5632433877693304 H2_DZ_X = -0.5678661810020245 H2_DZ_Y = 0.23687995032015863 H2_DZ_Z = -0.7882993654763979 ############# END of Description of junction: j4