#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS1HS3
FINGERPRINT = 148
LOOP_LENGTH_SUM = 4
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  21
S1_NAME_ID3 = 29
S1_NUM_ID5_ORIG =  21
S1_NUM_ID3_ORIG = 29
S1_NAME2_ID5 =  23
S1_NAME2_ID3 = 27
S1_NUM2_ID5_ORIG =  23
S1_NUM2_ID3_ORIG = 27
S1_SQ2 = CGAGC
S1_SQLEN2 = 5
S1_SQ = ACCGAGCCA
S1_SQLEN = 9
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  41
S2_NAME_ID3 = 47
S2_NUM_ID5_ORIG =  41
S2_NUM_ID3_ORIG = 47
S2_NAME2_ID5 =  43
S2_NAME2_ID3 = 45
S2_NUM2_ID5_ORIG =  43
S2_NUM2_ID3_ORIG = 45
S2_SQ2 = GGA
S2_SQLEN2 = 3
S2_SQ = UGGGAGU
S2_SQLEN = 7
S2_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 7
H1_INID2 = 3
H1_OUTID2 = 5
H1_INID2_ORIG = 23
H1_OUTID2_ORIG = 45
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = 9.100019403013942
H1_P_Y = 48.98363464560648
H1_P_Z = 22.500360744298664
# Orientation:
H1_DX_X = 0.26795143661597187
H1_DX_Y = -0.778443989959051
H1_DX_Z = -0.5676504048374049
H1_DY_X = -0.9632047515115332
H1_DY_Y = -0.20364273554373113
H1_DY_Z = -0.1754030869907055
H1_DZ_X = 0.020943597614580867
H1_DZ_Y = 0.593763076282869
H1_DZ_Z = -0.8043673134595046
## Properties of helix 2
H2_INID = 1
H2_OUTID = 9
H2_INID2 = 3
H2_OUTID2 = 7
H2_INID2_ORIG = 43
H2_OUTID2_ORIG = 27
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 19.039622022767496
H2_P_Y = 35.438166400703395
H2_P_Z = 38.133611662835534
# Orientation:
H2_DX_X = 0.2859340988406416
H2_DX_Y = 0.9152776101307012
H2_DX_Z = 0.28374035228288363
H2_DY_X = -0.8189413592718111
H2_DY_Y = 0.07965600317378119
H2_DY_Z = 0.5683220664662088
H2_DZ_X = 0.4975708403777581
H2_DZ_Y = -0.39486936770507697
H2_DZ_Z = 0.7723350576362336
#############  END of Description of junction: j1