#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = 3HS2HS4
FINGERPRINT = 78:88:95:99:166:167
LOOP_LENGTH_SUM = 6
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  924
S1_NAME_ID3 = 927
S1_NUM_ID5_ORIG =  924
S1_NUM_ID3_ORIG = 927
S1_NAME2_ID5 =  925
S1_NAME2_ID3 = 926
S1_NUM2_ID5_ORIG =  925
S1_NUM2_ID3_ORIG = 926
S1_SQ2 = CA
S1_SQLEN2 = 2
S1_SQ = GCAC
S1_SQLEN = 4
S1_CHAR = B
## Properties of strand 2
S2_NAME_ID5 =  906
S2_NAME_ID3 = 911
S2_NUM_ID5_ORIG =  906
S2_NUM_ID3_ORIG = 911
S2_NAME2_ID5 =  907
S2_NAME2_ID3 = 910
S2_NUM2_ID5_ORIG =  907
S2_NUM2_ID3_ORIG = 910
S2_SQ2 = AUCG
S2_SQLEN2 = 4
S2_SQ = UAUCGC
S2_SQLEN = 6
S2_CHAR = B
## Properties of strand 3
S3_NAME_ID5 =  943
S3_NAME_ID3 = 950
S3_NUM_ID5_ORIG =  943
S3_NUM_ID3_ORIG = 950
S3_NAME2_ID5 =  944
S3_NAME2_ID3 = 949
S3_NUM2_ID5_ORIG =  944
S3_NUM2_ID3_ORIG = 949
S3_SQ2 = CAUUCC
S3_SQLEN2 = 6
S3_SQ = GCAUUCCG
S3_SQLEN = 8
S3_CHAR = B
## Properties of strand 4
S4_NAME_ID5 =  964
S4_NAME_ID3 = 967
S4_NUM_ID5_ORIG =  964
S4_NUM_ID3_ORIG = 967
S4_NAME2_ID5 =  965
S4_NAME2_ID3 = 966
S4_NUM2_ID5_ORIG =  965
S4_NUM2_ID3_ORIG = 966
S4_SQ2 = GU
S4_SQLEN2 = 2
S4_SQ = CGUA
S4_SQLEN = 4
S4_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 6
H1_INID2 = 2
H1_OUTID2 = 5
H1_INID2_ORIG = 925
H1_OUTID2_ORIG = 910
H1_INSEQ_CHAR = B
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = 18.109105721060637
H1_P_Y = 20.179114475095513
H1_P_Z = 30.002535206181168
# Orientation:
H1_DX_X = 0.9726634540163381
H1_DX_Y = -0.14069839500826475
H1_DX_Z = 0.18474243384534716
H1_DY_X = 0.18073085579609938
H1_DY_Y = -0.040887648666732446
H1_DY_Z = -0.9826823280947501
H1_DZ_X = 0.1458155100948204
H1_DZ_Y = 0.9892078456161819
H1_DZ_Z = -0.014341380239809354
## Properties of helix 2
H2_INID = 1
H2_OUTID = 4
H2_INID2 = 2
H2_OUTID2 = 3
H2_INID2_ORIG = 944
H2_OUTID2_ORIG = 926
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = B
# Position:
H2_P_X = 15.25620375226698
H2_P_Y = 6.859647979769562
H2_P_Z = 25.3173966088859
# Orientation:
H2_DX_X = 0.6648189749005926
H2_DX_Y = 0.05221302044275067
H2_DX_Z = 0.7451775165075567
H2_DY_X = -0.7397938199086092
H2_DY_Y = -0.09224989851493781
H2_DY_Z = 0.6664796022752775
H2_DZ_X = 0.10354146337171066
H2_DZ_Y = -0.9943660074239418
H2_DZ_Z = -0.02270261312307653
## Properties of helix 3
H3_INID = 1
H3_OUTID = 8
H3_INID2 = 2
H3_OUTID2 = 7
H3_INID2_ORIG = 965
H3_OUTID2_ORIG = 949
H3_INSEQ_CHAR = B
H3_OUTSEQ_CHAR = B
# Position:
H3_P_X = 20.00947020582314
H3_P_Y = 39.027451726090945
H3_P_Z = 37.09689944051501
# Orientation:
H3_DX_X = 0.07454157794143867
H3_DX_Y = -0.7083216922934952
H3_DX_Z = 0.7019429701795445
H3_DY_X = 0.05755896114328962
H3_DY_Y = 0.7057838319173584
H3_DY_Z = 0.7060850859465546
H3_DZ_X = -0.9955553822616316
H3_DZ_Y = -0.012229588322000495
H3_DZ_Z = 0.09338050128035036
## Properties of helix 4
H4_INID = 1
H4_OUTID = 4
H4_INID2 = 2
H4_OUTID2 = 3
H4_INID2_ORIG = 907
H4_OUTID2_ORIG = 966
H4_INSEQ_CHAR = B
H4_OUTSEQ_CHAR = B
# Position:
H4_P_X = 33.846341874359226
H4_P_Y = 39.110753856483164
H4_P_Z = 36.492039177266705
# Orientation:
H4_DX_X = -0.14984670360381358
H4_DX_Y = -0.7641315415521603
H4_DX_Z = 0.6274144982578846
H4_DY_X = 0.0021203902452313628
H4_DY_Y = -0.6348262881097995
H4_DY_Z = -0.7726519836704853
H4_DZ_X = 0.9887069684007912
H4_DZ_Y = -0.11444898920414914
H4_DZ_Z = 0.09674688370107987
#############  END of Description of junction: j1