#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = 2HS1HS2HS5
FINGERPRINT = 74:89:98:99:163:167
LOOP_LENGTH_SUM = 8
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  924
S1_NAME_ID3 = 928
S1_NUM_ID5_ORIG =  924
S1_NUM_ID3_ORIG = 928
S1_NAME2_ID5 =  925
S1_NAME2_ID3 = 927
S1_NUM2_ID5_ORIG =  925
S1_NUM2_ID3_ORIG = 927
S1_SQ2 = CAC
S1_SQLEN2 = 3
S1_SQ = GCACC
S1_SQLEN = 5
S1_CHAR = B
## Properties of strand 2
S2_NAME_ID5 =  906
S2_NAME_ID3 = 911
S2_NUM_ID5_ORIG =  906
S2_NUM_ID3_ORIG = 911
S2_NAME2_ID5 =  907
S2_NAME2_ID3 = 910
S2_NUM2_ID5_ORIG =  907
S2_NUM2_ID3_ORIG = 910
S2_SQ2 = AUCG
S2_SQLEN2 = 4
S2_SQ = UAUCGC
S2_SQLEN = 6
S2_CHAR = B
## Properties of strand 3
S3_NAME_ID5 =  942
S3_NAME_ID3 = 950
S3_NUM_ID5_ORIG =  942
S3_NUM_ID3_ORIG = 950
S3_NAME2_ID5 =  943
S3_NAME2_ID3 = 949
S3_NUM2_ID5_ORIG =  943
S3_NUM2_ID3_ORIG = 949
S3_SQ2 = GCAUUCC
S3_SQLEN2 = 7
S3_SQ = GGCAUUCCG
S3_SQLEN = 9
S3_CHAR = B
## Properties of strand 4
S4_NAME_ID5 =  964
S4_NAME_ID3 = 967
S4_NUM_ID5_ORIG =  964
S4_NUM_ID3_ORIG = 967
S4_NAME2_ID5 =  965
S4_NAME2_ID3 = 966
S4_NUM2_ID5_ORIG =  965
S4_NUM2_ID3_ORIG = 966
S4_SQ2 = GU
S4_SQLEN2 = 2
S4_SQ = CGUA
S4_SQLEN = 4
S4_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 6
H1_INID2 = 2
H1_OUTID2 = 5
H1_INID2_ORIG = 925
H1_OUTID2_ORIG = 910
H1_INSEQ_CHAR = B
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = 18.83420825851262
H1_P_Y = 20.209122918579325
H1_P_Z = 29.98159348439847
# Orientation:
H1_DX_X = 0.9746143448523163
H1_DX_Y = -0.1182303672615852
H1_DX_Z = 0.19012748108908895
H1_DY_X = 0.18654028992293803
H1_DY_Y = -0.04080354813323339
H1_DY_Z = -0.9815996081372518
H1_DZ_X = 0.12381275799996061
H1_DZ_Y = 0.9921474944366544
H1_DZ_Z = -0.01771299634485146
## Properties of helix 2
H2_INID = 1
H2_OUTID = 5
H2_INID2 = 2
H2_OUTID2 = 4
H2_INID2_ORIG = 943
H2_OUTID2_ORIG = 927
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = B
# Position:
H2_P_X = 16.003652879417427
H2_P_Y = 4.280765272988457
H2_P_Z = 25.95565958210583
# Orientation:
H2_DX_X = 0.17859212642057187
H2_DX_Y = 0.02141584987978362
H2_DX_Z = 0.9836901004658429
H2_DY_X = -0.9684584970509551
H2_DY_Y = -0.1727325423317998
H2_DY_Z = 0.1795873278084983
H2_DZ_X = 0.17376130717275018
H2_DZ_Y = -0.9847359190125644
H2_DZ_Z = -0.010108310249425045
## Properties of helix 3
H3_INID = 1
H3_OUTID = 9
H3_INID2 = 2
H3_OUTID2 = 8
H3_INID2_ORIG = 965
H3_OUTID2_ORIG = 949
H3_INSEQ_CHAR = B
H3_OUTSEQ_CHAR = B
# Position:
H3_P_X = 20.263746217036136
H3_P_Y = 39.5241507940868
H3_P_Z = 37.45098719986358
# Orientation:
H3_DX_X = 0.08836105372676073
H3_DX_Y = -0.7198503555666065
H3_DX_Z = 0.6884822363539413
H3_DY_X = 0.05332719758395754
H3_DY_Y = 0.6936132238112194
H3_DY_Z = 0.7183710084295143
H3_DZ_X = -0.9946600093409508
H3_DZ_Y = -0.026761191020497677
H3_DZ_Z = 0.09967599747695743
## Properties of helix 4
H4_INID = 1
H4_OUTID = 4
H4_INID2 = 2
H4_OUTID2 = 3
H4_INID2_ORIG = 907
H4_OUTID2_ORIG = 966
H4_INSEQ_CHAR = B
H4_OUTSEQ_CHAR = B
# Position:
H4_P_X = 34.42451922551737
H4_P_Y = 39.63686174378958
H4_P_Z = 36.76189101021348
# Orientation:
H4_DX_X = -0.12996349396868112
H4_DX_Y = -0.7708915263521305
H4_DX_Z = 0.6235669529681189
H4_DY_X = 0.005380252980742739
H4_DY_Y = -0.6294398368695369
H4_DY_Z = -0.7770305944037972
H4_DZ_X = 0.9915041820957242
H4_DZ_Y = -0.09763066301187706
H4_DZ_Z = 0.08595179187512514
#############  END of Description of junction: j1