############# Start of Description of junction: j1 # Number of strands: NUM_STRANDS = 2 LILLEY = HS3HS19 FINGERPRINT = 134 LOOP_LENGTH_SUM = 22 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 53 S1_NAME_ID3 = 77 S1_NUM_ID5_ORIG = 53 S1_NUM_ID3_ORIG = 77 S1_NAME2_ID5 = 55 S1_NAME2_ID3 = 75 S1_NUM2_ID5_ORIG = 55 S1_NUM2_ID3_ORIG = 75 S1_SQ2 = ACGCGAUUACCUGCGAAAAGC S1_SQLEN2 = 21 S1_SQ = GGACGCGAUUACCUGCGAAAAGCCC S1_SQLEN = 25 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 106 S2_NAME_ID3 = 114 S2_NUM_ID5_ORIG = 106 S2_NUM_ID3_ORIG = 114 S2_NAME2_ID5 = 108 S2_NAME2_ID3 = 112 S2_NUM2_ID5_ORIG = 108 S2_NUM2_ID3_ORIG = 112 S2_SQ2 = GAUGU S2_SQLEN2 = 5 S2_SQ = GGGAUGUCC S2_SQLEN = 9 S2_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 9 H1_INID2 = 3 H1_OUTID2 = 7 H1_INID2_ORIG = 55 H1_OUTID2_ORIG = 112 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 2.347803533422953 H1_P_Y = 172.53438094990054 H1_P_Z = 123.5288708361276 # Orientation: H1_DX_X = 0.641228247124074 H1_DX_Y = -0.12467495307271292 H1_DX_Z = 0.7571542056717959 H1_DY_X = 0.5649382360999557 H1_DY_Y = -0.5910488680427761 H1_DY_Z = -0.5757655989876582 H1_DZ_X = 0.5192986852308143 H1_DZ_Y = 0.7969425272010824 H1_DZ_Z = -0.30856358154500185 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 25 H2_INID2 = 3 H2_OUTID2 = 23 H2_INID2_ORIG = 108 H2_OUTID2_ORIG = 75 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = -22.723101507470215 H2_P_Y = 165.8508960388766 H2_P_Z = 118.7629268631889 # Orientation: H2_DX_X = -0.3897915464842576 H2_DX_Y = 0.888897183556935 H2_DX_Z = 0.24067477506784485 H2_DY_X = 0.09254757723211782 H2_DY_Y = 0.2978346323658627 H2_DY_Z = -0.9501207700665901 H2_DZ_X = -0.9162409597032273 H2_DZ_Y = -0.3480751769776589 H2_DZ_Z = -0.19835870269309908 ############# END of Description of junction: j1