############# Start of Description of junction: j3 # Number of strands: NUM_STRANDS = 5 LILLEY = 2HS1HS1HS3HS5 FINGERPRINT = 21:74:85:85:100:102:118:157:161:173 LOOP_LENGTH_SUM = 10 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 114 S1_NAME_ID3 = 120 S1_NUM_ID5_ORIG = 114 S1_NUM_ID3_ORIG = 120 S1_NAME2_ID5 = 115 S1_NAME2_ID3 = 119 S1_NUM2_ID5_ORIG = 115 S1_NUM2_ID3_ORIG = 119 S1_SQ2 = GAAUG S1_SQLEN2 = 5 S1_SQ = CGAAUGG S1_SQLEN = 7 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 45 S2_NAME_ID3 = 53 S2_NUM_ID5_ORIG = 45 S2_NUM_ID3_ORIG = 53 S2_NAME2_ID5 = 46 S2_NAME2_ID3 = 52 S2_NUM2_ID5_ORIG = 46 S2_NUM2_ID3_ORIG = 52 S2_SQ2 = CGAUGAA S2_SQLEN2 = 7 S2_SQ = CCGAUGAAG S2_SQLEN = 9 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 127 S3_NAME_ID3 = 130 S3_NUM_ID5_ORIG = 127 S3_NUM_ID3_ORIG = 130 S3_NAME2_ID5 = 128 S3_NAME2_ID3 = 129 S3_NUM2_ID5_ORIG = 128 S3_NUM2_ID3_ORIG = 129 S3_SQ2 = CA S3_SQLEN2 = 2 S3_SQ = CCAC S3_SQLEN = 4 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 141 S4_NAME_ID3 = 145 S4_NUM_ID5_ORIG = 141 S4_NUM_ID3_ORIG = 145 S4_NAME2_ID5 = 142 S4_NAME2_ID3 = 144 S4_NUM2_ID5_ORIG = 142 S4_NUM2_ID3_ORIG = 144 S4_SQ2 = UAU S4_SQLEN2 = 3 S4_SQ = GUAUC S4_SQLEN = 5 S4_CHAR = 0 ## Properties of strand 5 S5_NAME_ID5 = 152 S5_NAME_ID3 = 156 S5_NUM_ID5_ORIG = 152 S5_NUM_ID3_ORIG = 156 S5_NAME2_ID5 = 153 S5_NAME2_ID3 = 155 S5_NUM2_ID5_ORIG = 153 S5_NUM2_ID3_ORIG = 155 S5_SQ2 = AUG S5_SQLEN2 = 3 S5_SQ = GAUGG S5_SQLEN = 5 S5_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 9 H1_INID2 = 2 H1_OUTID2 = 8 H1_INID2_ORIG = 115 H1_OUTID2_ORIG = 52 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 0.12271658724635781 H1_P_Y = 170.61164245058364 H1_P_Z = 124.70733184569785 # Orientation: H1_DX_X = 0.5429282935045353 H1_DX_Y = -0.5833973389481173 H1_DX_Z = -0.6040500087083132 H1_DY_X = 0.6744463880392529 H1_DY_Y = -0.12564828033450226 H1_DY_Z = 0.7275538325854569 H1_DZ_X = -0.500350814702109 H1_DZ_Y = -0.8024089073267078 H1_DZ_Z = 0.3252522216214828 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 7 H2_INID2 = 2 H2_OUTID2 = 6 H2_INID2_ORIG = 128 H2_OUTID2_ORIG = 119 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 9.549001409143353 H2_P_Y = 177.88357417028027 H2_P_Z = 132.95473894793625 # Orientation: H2_DX_X = 0.5975933210305069 H2_DX_Y = 0.7995913923764135 H2_DX_Z = 0.059462827861466394 H2_DY_X = 0.520192052319981 H2_DY_Y = -0.44307467578397564 H2_DY_Z = 0.7301267426838081 H2_DZ_X = 0.6101495319697054 H2_DZ_Y = -0.40538677447159444 H2_DZ_Z = -0.6807195543839271 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 4 H3_INID2 = 2 H3_OUTID2 = 3 H3_INID2_ORIG = 142 H3_OUTID2_ORIG = 129 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 1.3545850313586643 H3_P_Y = 186.53324839946572 H3_P_Z = 138.68878635073688 # Orientation: H3_DX_X = 0.8267983160497245 H3_DX_Y = 0.49708966076300953 H3_DX_Z = 0.2632611132314082 H3_DY_X = -0.21326840063242014 H3_DY_Y = 0.71010177976504 H3_DY_Z = -0.6710231379514369 H3_DZ_X = -0.5205008490569765 H3_DZ_Y = 0.49865552392108725 H3_DZ_Z = 0.6931244726555121 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 5 H4_INID2 = 2 H4_OUTID2 = 4 H4_INID2_ORIG = 153 H4_OUTID2_ORIG = 144 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = 8.342339677382737 H4_P_Y = 195.08131465072333 H4_P_Z = 118.1670482439847 # Orientation: H4_DX_X = 0.9571396269090133 H4_DX_Y = -0.2152124559932247 H4_DX_Z = -0.1938229433937977 H4_DY_X = -0.222304194229336 H4_DY_Y = -0.11694221865073473 H4_DY_Z = -0.9679387184760628 H4_DZ_X = 0.18564638382827603 H4_DZ_Y = 0.9695401571272839 H4_DZ_Z = -0.15977266314698113 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 5 H5_INID2 = 2 H5_OUTID2 = 4 H5_INID2_ORIG = 46 H5_OUTID2_ORIG = 155 H5_INSEQ_CHAR = 0 H5_OUTSEQ_CHAR = 0 # Position: H5_P_X = 10.43927659677665 H5_P_Y = 176.61452678504963 H5_P_Z = 105.67499834380598 # Orientation: H5_DX_X = -0.008989866726071938 H5_DX_Y = -0.5471012241329447 H5_DX_Z = 0.8370181795209106 H5_DY_X = -0.7913952794741625 H5_DY_Y = -0.507766530668448 H5_DY_Z = -0.3403919240507207 H5_DZ_X = 0.611238655454855 H5_DZ_Y = -0.6654723141387535 H5_DZ_Z = -0.4284085727346678 ############# END of Description of junction: j3