############# Start of Description of junction: j7 # Number of strands: NUM_STRANDS = 5 LILLEY = HS2HS2HS8HS2HS4 FINGERPRINT = 68:74:84:87:98:107:115:115:139:160 LOOP_LENGTH_SUM = 18 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 679 S1_NAME_ID3 = 686 S1_NUM_ID5_ORIG = 679 S1_NUM_ID3_ORIG = 686 S1_NAME2_ID5 = 681 S1_NAME2_ID3 = 684 S1_NUM2_ID5_ORIG = 681 S1_NUM2_ID3_ORIG = 684 S1_SQ2 = AGAC S1_SQLEN2 = 4 S1_SQ = CUAGACUC S1_SQLEN = 8 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 591 S2_NAME_ID3 = 600 S2_NUM_ID5_ORIG = 591 S2_NUM_ID3_ORIG = 600 S2_NAME2_ID5 = 593 S2_NAME2_ID3 = 598 S2_NUM2_ID5_ORIG = 593 S2_NUM2_ID3_ORIG = 598 S2_SQ2 = CGACUU S2_SQLEN2 = 6 S2_SQ = GGCGACUUAG S2_SQLEN = 10 S2_CHAR = 0 ## Properties of strand 3 S3_NAME_ID5 = 820 S3_NAME_ID3 = 827 S3_NUM_ID5_ORIG = 820 S3_NUM_ID3_ORIG = 827 S3_NAME2_ID5 = 822 S3_NAME2_ID3 = 825 S3_NUM2_ID5_ORIG = 822 S3_NUM2_ID3_ORIG = 825 S3_SQ2 = GUUC S3_SQLEN2 = 4 S3_SQ = UAGUUCUC S3_SQLEN = 8 S3_CHAR = 0 ## Properties of strand 4 S4_NAME_ID5 = 1207 S4_NAME_ID3 = 1214 S4_NUM_ID5_ORIG = 1207 S4_NUM_ID3_ORIG = 1214 S4_NAME2_ID5 = 1209 S4_NAME2_ID3 = 1212 S4_NUM2_ID5_ORIG = 1209 S4_NUM2_ID3_ORIG = 1212 S4_SQ2 = GCGU S4_SQLEN2 = 4 S4_SQ = GAGCGUUC S4_SQLEN = 8 S4_CHAR = 0 ## Properties of strand 5 S5_NAME_ID5 = 1258 S5_NAME_ID3 = 1271 S5_NUM_ID5_ORIG = 1258 S5_NUM_ID3_ORIG = 1271 S5_NAME2_ID5 = 1260 S5_NAME2_ID3 = 1269 S5_NUM2_ID5_ORIG = 1260 S5_NUM2_ID3_ORIG = 1269 S5_SQ2 = AGUGCGGAUG S5_SQLEN2 = 10 S5_SQ = GAAGUGCGGAUGCC S5_SQLEN = 14 S5_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 10 H1_INID2 = 3 H1_OUTID2 = 8 H1_INID2_ORIG = 681 H1_OUTID2_ORIG = 598 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 18.696260585757468 H1_P_Y = 142.81483110786309 H1_P_Z = 75.97781600181068 # Orientation: H1_DX_X = -0.28980763411301425 H1_DX_Y = 0.8895090171097024 H1_DX_Z = 0.3532495487475842 H1_DY_X = 0.8524421189520659 H1_DY_Y = 0.40770663878674895 H1_DY_Z = -0.3272884515618131 H1_DZ_X = -0.435148215032914 H1_DZ_Y = 0.2062741020336034 H1_DZ_Z = -0.8764114477709057 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 822 H2_OUTID2_ORIG = 684 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 32.58514346899109 H2_P_Y = 137.50703556880242 H2_P_Z = 93.93301063560092 # Orientation: H2_DX_X = -0.7431617476134527 H2_DX_Y = -0.18323504327804585 H2_DX_Z = 0.6435336322205814 H2_DY_X = 0.6449028295475756 H2_DY_Y = -0.4525172686593635 H2_DY_Z = 0.6158964702014487 H2_DZ_X = 0.17835626517073422 H2_DZ_Y = 0.8727273574719447 H2_DZ_Z = 0.454462322084467 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 1209 H3_OUTID2_ORIG = 825 H3_INSEQ_CHAR = 0 H3_OUTSEQ_CHAR = 0 # Position: H3_P_X = 20.219840466237585 H3_P_Y = 118.4305006470428 H3_P_Z = 79.70365504305677 # Orientation: H3_DX_X = -0.6017763263340115 H3_DX_Y = -0.777510676296103 H3_DX_Z = 0.18259901782190013 H3_DY_X = -0.15593053498413312 H3_DY_Y = -0.10985224613527578 H3_DY_Z = -0.9816405412770024 H3_DZ_X = 0.7832949133777731 H3_DZ_Y = -0.6192008012467483 H3_DZ_Z = -0.05513117459189232 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 8 H4_INID2 = 3 H4_OUTID2 = 6 H4_INID2_ORIG = 1260 H4_OUTID2_ORIG = 1212 H4_INSEQ_CHAR = 0 H4_OUTSEQ_CHAR = 0 # Position: H4_P_X = -2.5199837859077725 H4_P_Y = 126.90378360291159 H4_P_Z = 85.15841299494974 # Orientation: H4_DX_X = 0.0868857445572897 H4_DX_Y = 0.7007674631612133 H4_DX_Z = 0.7080789715613207 H4_DY_X = -0.143083047762814 H4_DY_Y = 0.7121757886487075 H4_DY_Z = -0.6872647870402773 H4_DZ_X = -0.9858895013314775 H4_DZ_Y = -0.04160058457775051 H4_DZ_Z = 0.16214586805453735 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 14 H5_INID2 = 3 H5_OUTID2 = 12 H5_INID2_ORIG = 593 H5_OUTID2_ORIG = 1269 H5_INSEQ_CHAR = 0 H5_OUTSEQ_CHAR = 0 # Position: H5_P_X = 19.383006822853346 H5_P_Y = 123.0763123914884 H5_P_Z = 110.93009319004597 # Orientation: H5_DX_X = -0.3172154345079079 H5_DX_Y = 0.9371316133165521 H5_DX_Z = 0.14546032941208864 H5_DY_X = -0.941924998923021 H5_DY_Y = -0.32916577869394814 H5_DY_Z = 0.06653710649462141 H5_DZ_X = 0.11023458855473578 H5_DZ_Y = -0.11590612347723095 H5_DZ_Z = 0.9871241593774585 ############# END of Description of junction: j7