############# Start of Description of junction: j1 # Number of strands: NUM_STRANDS = 2 LILLEY = HS3HS19 FINGERPRINT = 131 LOOP_LENGTH_SUM = 22 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 53 S1_NAME_ID3 = 77 S1_NUM_ID5_ORIG = 53 S1_NUM_ID3_ORIG = 77 S1_NAME2_ID5 = 55 S1_NAME2_ID3 = 75 S1_NUM2_ID5_ORIG = 55 S1_NUM2_ID3_ORIG = 75 S1_SQ2 = ACGCGAUUACCUGCGAAAAGC S1_SQLEN2 = 21 S1_SQ = GGACGCGAUUACCUGCGAAAAGCCC S1_SQLEN = 25 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 106 S2_NAME_ID3 = 114 S2_NUM_ID5_ORIG = 106 S2_NUM_ID3_ORIG = 114 S2_NAME2_ID5 = 108 S2_NAME2_ID3 = 112 S2_NUM2_ID5_ORIG = 108 S2_NUM2_ID3_ORIG = 112 S2_SQ2 = GAUGU S2_SQLEN2 = 5 S2_SQ = GGGAUGUCC S2_SQLEN = 9 S2_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 9 H1_INID2 = 3 H1_OUTID2 = 7 H1_INID2_ORIG = 55 H1_OUTID2_ORIG = 112 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 190.82429131092772 H1_P_Y = 6.225623087233615 H1_P_Z = 125.01499485605085 # Orientation: H1_DX_X = -0.7459312774770126 H1_DX_Y = 0.4917222978105569 H1_DX_Z = 0.4492167751959215 H1_DY_X = -0.19406072845234235 H1_DY_Y = 0.48474655497959684 H1_DY_Z = -0.8528547420914947 H1_DZ_X = -0.6371239776951256 H1_DZ_Y = -0.723346361898173 H1_DZ_Z = -0.2661636296991361 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 25 H2_INID2 = 3 H2_OUTID2 = 23 H2_INID2_ORIG = 108 H2_OUTID2_ORIG = 75 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 217.02248748556744 H2_P_Y = 3.798414065933951 H2_P_Z = 126.54871683681887 # Orientation: H2_DX_X = 9.032601593617073E-4 H2_DX_Y = -0.7997994712328591 H2_DX_Z = 0.6002665990513947 H2_DY_X = 0.024343941254016954 H2_DY_Y = -0.6000713633717312 H2_DY_Z = -0.7995759697398483 H2_DZ_X = 0.9997032342877219 H2_DZ_Y = 0.015335079941899643 H2_DZ_Z = 0.018928250787368484 ############# END of Description of junction: j1