############# Start of Description of junction: j5 # Number of strands: NUM_STRANDS = 2 LILLEY = HS5HS7 FINGERPRINT = 170 LOOP_LENGTH_SUM = 12 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 353 S1_NAME_ID3 = 365 S1_NUM_ID5_ORIG = 353 S1_NUM_ID3_ORIG = 365 S1_NAME2_ID5 = 355 S1_NAME2_ID3 = 363 S1_NUM2_ID5_ORIG = 355 S1_NUM2_ID3_ORIG = 363 S1_SQ2 = GAACGAGCG S1_SQLEN2 = 9 S1_SQ = GCGAACGAGCGGU S1_SQLEN = 13 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 297 S2_NAME_ID3 = 307 S2_NUM_ID5_ORIG = 297 S2_NUM_ID3_ORIG = 307 S2_NAME2_ID5 = 299 S2_NAME2_ID3 = 305 S2_NUM2_ID5_ORIG = 299 S2_NUM2_ID3_ORIG = 305 S2_SQ2 = CCCUCAA S2_SQLEN2 = 7 S2_SQ = ACCCCUCAAGC S2_SQLEN = 11 S2_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 11 H1_INID2 = 3 H1_OUTID2 = 9 H1_INID2_ORIG = 355 H1_OUTID2_ORIG = 305 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 227.81413163884628 H1_P_Y = 5.142435885232651 H1_P_Z = 106.02011259189109 # Orientation: H1_DX_X = 0.26187223062652265 H1_DX_Y = -0.14178056968454555 H1_DX_Z = 0.9546314497682431 H1_DY_X = 0.7900300142590879 H1_DY_Y = -0.5366444353521853 H1_DY_Z = -0.29642086056027495 H1_DZ_X = 0.554324373806935 H1_DZ_Y = 0.8318118898317479 H1_DZ_Z = -0.02852136984944309 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 13 H2_INID2 = 3 H2_OUTID2 = 11 H2_INID2_ORIG = 299 H2_OUTID2_ORIG = 363 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 208.57528881079918 H2_P_Y = -22.50148126035854 H2_P_Z = 109.11213524288655 # Orientation: H2_DX_X = 0.7247798492412869 H2_DX_Y = -0.3573342054244151 H2_DX_Z = -0.5890725216537476 H2_DY_X = 0.43878989908458266 H2_DY_Y = -0.41977541449871225 H2_DY_Z = 0.7945137039999963 H2_DZ_X = -0.5311850850646351 H2_DZ_Y = -0.834326594935181 H2_DZ_Z = -0.14745012169791494 ############# END of Description of junction: j5