############# Start of Description of junction: j2 # Number of strands: NUM_STRANDS = 2 LILLEY = HS2HS2 FINGERPRINT = 100 LOOP_LENGTH_SUM = 4 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 60 S1_NAME_ID3 = 65 S1_NUM_ID5_ORIG = 60 S1_NUM_ID3_ORIG = 65 S1_NAME2_ID5 = 61 S1_NAME2_ID3 = 64 S1_NUM2_ID5_ORIG = 61 S1_NUM2_ID3_ORIG = 64 S1_SQ2 = UUAC S1_SQLEN2 = 4 S1_SQ = AUUACC S1_SQLEN = 6 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 87 S2_NAME_ID3 = 92 S2_NUM_ID5_ORIG = 87 S2_NUM_ID3_ORIG = 92 S2_NAME2_ID5 = 88 S2_NAME2_ID3 = 91 S2_NUM2_ID5_ORIG = 88 S2_NUM2_ID3_ORIG = 91 S2_SQ2 = GAGA S2_SQLEN2 = 4 S2_SQ = GGAGAU S2_SQLEN = 6 S2_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 2 H1_OUTID2 = 5 H1_INID2_ORIG = 61 H1_OUTID2_ORIG = 91 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 218.2539355596222 H1_P_Y = 24.67400851809498 H1_P_Z = 134.41799239681168 # Orientation: H1_DX_X = 0.152652969708015 H1_DX_Y = 0.9508573274191754 H1_DX_Z = 0.2693833954284912 H1_DY_X = -0.4389019172631379 H1_DY_Y = -0.17899567010988804 H1_DY_Z = 0.8805257844632592 H1_DZ_X = 0.8854728555196232 H1_DZ_Y = -0.25264776463521343 H1_DZ_Z = 0.3900088834408564 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 2 H2_OUTID2 = 5 H2_INID2_ORIG = 88 H2_OUTID2_ORIG = 64 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 205.61838755289756 H2_P_Y = 21.18592828327818 H2_P_Z = 129.98606526766017 # Orientation: H2_DX_X = -0.43486686794494744 H2_DX_Y = 0.2496012474735032 H2_DX_Z = -0.8652109710489242 H2_DY_X = 0.78401468060909 H2_DY_Y = -0.3676852247658182 H2_DY_Z = -0.5001285395559307 H2_DZ_X = -0.4429579977302467 H2_DZ_Y = -0.8958274346929649 H2_DZ_Z = -0.035796920234020035 ############# END of Description of junction: j2