############# Start of Description of junction: j20 # Number of strands: NUM_STRANDS = 5 LILLEY = HS1HS2HS18HS15HS9 FINGERPRINT = 20:55:69:85:92:107:126:146:151:171 LOOP_LENGTH_SUM = 45 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 649 S1_NAME_ID3 = 656 S1_NUM_ID5_ORIG = 649 S1_NUM_ID3_ORIG = 656 S1_NAME2_ID5 = 651 S1_NAME2_ID3 = 654 S1_NUM2_ID5_ORIG = 651 S1_NUM2_ID3_ORIG = 654 S1_SQ2 = CUAG S1_SQLEN2 = 4 S1_SQ = GGCUAGAC S1_SQLEN = 8 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 567 S2_NAME_ID3 = 590 S2_NUM_ID5_ORIG = 567 S2_NUM_ID3_ORIG = 590 S2_NAME2_ID5 = 569 S2_NAME2_ID3 = 588 S2_NUM2_ID5_ORIG = 569 S2_NUM2_ID3_ORIG = 588 S2_SQ2 = CGUAAAGGGCGUGUAGGCGG S2_SQLEN2 = 20 S2_SQ = GGCGUAAAGGGCGUGUAGGCGGCC S2_SQLEN = 24 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 750 S3_NAME_ID3 = 770 S3_NUM_ID5_ORIG = 750 S3_NUM_ID3_ORIG = 770 S3_NAME2_ID5 = 752 S3_NAME2_ID3 = 768 S3_NUM2_ID5_ORIG = 752 S3_NUM2_ID3_ORIG = 768 S3_SQ2 = GACGCUGAGGCGCGAAA S3_SQLEN2 = 17 S3_SQ = GUGACGCUGAGGCGCGAAAGC S3_SQLEN = 21 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 809 S4_NAME_ID3 = 823 S4_NUM_ID5_ORIG = 809 S4_NUM_ID3_ORIG = 823 S4_NAME2_ID5 = 811 S4_NAME2_ID3 = 821 S4_NUM2_ID5_ORIG = 811 S4_NUM2_ID3_ORIG = 821 S4_SQ2 = CCUAAACGAUG S4_SQLEN2 = 11 S4_SQ = GCCCUAAACGAUGCG S4_SQLEN = 15 S4_CHAR = A ## Properties of strand 5 S5_NAME_ID5 = 877 S5_NAME_ID3 = 883 S5_NUM_ID5_ORIG = 877 S5_NUM_ID3_ORIG = 883 S5_NAME2_ID5 = 879 S5_NAME2_ID3 = 881 S5_NUM2_ID5_ORIG = 879 S5_NUM2_ID3_ORIG = 881 S5_SQ2 = CCG S5_SQLEN2 = 3 S5_SQ = CGCCGCC S5_SQLEN = 7 S5_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 24 H1_INID2 = 3 H1_OUTID2 = 22 H1_INID2_ORIG = 651 H1_OUTID2_ORIG = 588 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 65.94634552605106 H1_P_Y = 46.33305023949505 H1_P_Z = 157.77550494445688 # Orientation: H1_DX_X = -0.9322069570502123 H1_DX_Y = -0.3615395463465987 H1_DX_Z = -0.016713636788807662 H1_DY_X = 0.0346682238109679 H1_DY_Y = -0.13516660531907831 H1_DY_Z = 0.9902161900637338 H1_DZ_X = -0.36026143768796715 H1_DZ_Y = 0.9225069892602491 H1_DZ_Z = 0.13853718374855362 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 752 H2_OUTID2_ORIG = 654 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 67.57071902171997 H2_P_Y = 25.023455658495124 H2_P_Z = 148.30090780403705 # Orientation: H2_DX_X = 0.8043293376396576 H2_DX_Y = 0.5678544396882508 H2_DX_Z = -0.17491612829729775 H2_DY_X = 0.46096322064936146 H2_DY_Y = -0.41059173392232395 H2_DY_Z = 0.7867193510033985 H2_DZ_X = 0.3749229598473818 H2_DZ_Y = -0.7134113563443023 H2_DZ_Z = -0.5920109887647982 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 21 H3_INID2 = 3 H3_OUTID2 = 19 H3_INID2_ORIG = 811 H3_OUTID2_ORIG = 768 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 102.85079960439604 H3_P_Y = 28.313798411659555 H3_P_Z = 115.20132521678306 # Orientation: H3_DX_X = 0.34385572577643586 H3_DX_Y = 0.816112139586938 H3_DX_Z = -0.4644612098653482 H3_DY_X = 0.6553414789089373 H3_DY_Y = 0.14568195997379263 H3_DY_Z = 0.7411506679209197 H3_DZ_X = 0.6725256767382177 H3_DZ_Y = -0.5592295969966408 H3_DZ_Z = -0.48473856043312935 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 15 H4_INID2 = 3 H4_OUTID2 = 13 H4_INID2_ORIG = 879 H4_OUTID2_ORIG = 821 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 64.08878982301289 H4_P_Y = 42.58550571358292 H4_P_Z = 129.1335773976484 # Orientation: H4_DX_X = 0.711549464200516 H4_DX_Y = -0.3762463889474006 H4_DX_Z = 0.593410494346017 H4_DY_X = -0.47319983526683984 H4_DY_Y = 0.36770502983520004 H4_DY_Z = 0.8005466425745169 H4_DZ_X = -0.5194028069806507 H4_DZ_Y = -0.8504302827615788 H4_DZ_Z = 0.08360058769341094 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 7 H5_INID2 = 3 H5_OUTID2 = 5 H5_INID2_ORIG = 569 H5_OUTID2_ORIG = 881 H5_INSEQ_CHAR = A H5_OUTSEQ_CHAR = A # Position: H5_P_X = 74.3455648959127 H5_P_Y = 60.02336250226925 H5_P_Z = 125.13989721107251 # Orientation: H5_DX_X = 0.35578838258859946 H5_DX_Y = -0.4274004002302405 H5_DX_Z = -0.8311098150653891 H5_DY_X = -0.8042732289910077 H5_DY_Y = 0.31290124325236235 H5_DY_Z = -0.5052102385141382 H5_DZ_X = 0.4759823525545528 H5_DZ_Y = 0.848187308236902 H5_DZ_Z = -0.2324200727185115 ############# END of Description of junction: j20