#############  Start of Description of junction: j11
# Number of strands:
NUM_STRANDS = 5
LILLEY = HS1HS2HS1HS2HS4
FINGERPRINT = 11:52:52:81:91:97:99:109:132:142
LOOP_LENGTH_SUM = 10
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  402
S1_NAME_ID3 = 407
S1_NUM_ID5_ORIG =  402
S1_NUM_ID3_ORIG = 407
S1_NAME2_ID5 =  403
S1_NAME2_ID3 = 406
S1_NUM2_ID5_ORIG =  403
S1_NUM2_ID3_ORIG = 406
S1_SQ2 = CUUG
S1_SQLEN2 = 4
S1_SQ = GCUUGG
S1_SQLEN = 6
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  36
S2_NAME_ID3 = 40
S2_NUM_ID5_ORIG =  36
S2_NUM_ID3_ORIG = 40
S2_NAME2_ID5 =  37
S2_NAME2_ID3 = 39
S2_NUM2_ID5_ORIG =  37
S2_NUM2_ID3_ORIG = 39
S2_SQ2 = UGG
S2_SQLEN2 = 3
S2_SQ = CUGGC
S2_SQLEN = 5
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  435
S3_NAME_ID3 = 440
S3_NUM_ID5_ORIG =  435
S3_NUM_ID3_ORIG = 440
S3_NAME2_ID5 =  436
S3_NAME2_ID3 = 439
S3_NUM2_ID5_ORIG =  436
S3_NUM2_ID3_ORIG = 439
S3_SQ2 = CUGA
S3_SQLEN2 = 4
S3_SQ = CCUGAA
S3_SQLEN = 6
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  494
S4_NAME_ID3 = 501
S4_NUM_ID5_ORIG =  494
S4_NUM_ID3_ORIG = 501
S4_NAME2_ID5 =  495
S4_NAME2_ID3 = 500
S4_NUM2_ID5_ORIG =  495
S4_NUM2_ID3_ORIG = 500
S4_SQ2 = UAAUAG
S4_SQLEN2 = 6
S4_SQ = GUAAUAGC
S4_SQLEN = 8
S4_CHAR = A
## Properties of strand 5
S5_NAME_ID5 =  544
S5_NAME_ID3 = 548
S5_NUM_ID5_ORIG =  544
S5_NUM_ID3_ORIG = 548
S5_NAME2_ID5 =  545
S5_NAME2_ID3 = 547
S5_NUM2_ID5_ORIG =  545
S5_NUM2_ID3_ORIG = 547
S5_SQ2 = CGA
S5_SQLEN2 = 3
S5_SQ = GCGAG
S5_SQLEN = 5
S5_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 5
H1_INID2 = 2
H1_OUTID2 = 4
H1_INID2_ORIG = 403
H1_OUTID2_ORIG = 39
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 62.4892042798206
H1_P_Y = 108.74600228346118
H1_P_Z = 111.82652918144929
# Orientation:
H1_DX_X = -0.10417559476160676
H1_DX_Y = 0.9608560814503306
H1_DX_Z = -0.2567158666619065
H1_DY_X = -0.6052682258572588
H1_DY_Y = 0.1435659151939035
H1_DY_Z = 0.782968200351803
H1_DZ_X = 0.7891754052323705
H1_DZ_Y = 0.23694813511494317
H1_DZ_Z = 0.5666195911207694
## Properties of helix 2
H2_INID = 1
H2_OUTID = 6
H2_INID2 = 2
H2_OUTID2 = 5
H2_INID2_ORIG = 436
H2_OUTID2_ORIG = 406
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 42.414742998423456
H2_P_Y = 116.3024404865103
H2_P_Z = 94.60065791325667
# Orientation:
H2_DX_X = -0.133207844562925
H2_DX_Y = -0.42779534406066944
H2_DX_Z = 0.8940060479364291
H2_DY_X = -0.9538396283357429
H2_DY_Y = 0.3003122781146885
H2_DY_Z = 0.0015808320264341091
H2_DZ_X = -0.2691572654847576
H2_DZ_Y = -0.8525278172667328
H2_DZ_Z = -0.4480521032460274
## Properties of helix 3
H3_INID = 1
H3_OUTID = 6
H3_INID2 = 2
H3_OUTID2 = 5
H3_INID2_ORIG = 495
H3_OUTID2_ORIG = 439
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 48.00018097239586
H3_P_Y = 127.2640955979649
H3_P_Z = 110.35041507441827
# Orientation:
H3_DX_X = 0.7305505732926392
H3_DX_Y = -0.4124418609865188
H3_DX_Z = -0.544231174380684
H3_DY_X = 0.055130664005119456
H3_DY_Y = 0.8300120314858503
H3_DY_Z = -0.555014087636593
H3_DZ_X = 0.6806294658242109
H3_DZ_Y = 0.37546203389250365
H3_DZ_Z = 0.6291039591014709
## Properties of helix 4
H4_INID = 1
H4_OUTID = 8
H4_INID2 = 2
H4_OUTID2 = 7
H4_INID2_ORIG = 545
H4_OUTID2_ORIG = 500
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = 55.76490951814629
H4_P_Y = 98.56805454577956
H4_P_Z = 93.02571748548243
# Orientation:
H4_DX_X = 0.8761128573737054
H4_DX_Y = 0.19031990271825805
H4_DX_Z = 0.44294987952790166
H4_DY_X = -0.07208508128505287
H4_DY_Y = -0.8567389452416307
H4_DY_Z = 0.5106878897745446
H4_DZ_X = 0.47668648208293973
H4_DZ_Y = -0.4793503044075038
H4_DZ_Z = -0.7368807796813712
## Properties of helix 5
H5_INID = 1
H5_OUTID = 5
H5_INID2 = 2
H5_OUTID2 = 4
H5_INID2_ORIG = 37
H5_OUTID2_ORIG = 547
H5_INSEQ_CHAR = A
H5_OUTSEQ_CHAR = A
# Position:
H5_P_X = 69.30310201232197
H5_P_Y = 102.42287803694111
H5_P_Z = 105.04191192215907
# Orientation:
H5_DX_X = -0.9992032195268195
H5_DX_Y = 0.003990181780181956
H5_DX_Z = -0.039711516422983095
H5_DY_X = 0.03509506964488196
H5_DY_Y = -0.38599946327494195
H5_DY_Z = -0.9218311941120731
H5_DZ_X = -0.019006898060240474
H5_DZ_Y = -0.9224903754515879
H5_DZ_Z = 0.38555187073247055
#############  END of Description of junction: j11