############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS2 FINGERPRINT = 140 LOOP_LENGTH_SUM = 3 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 354 S1_NAME_ID3 = 361 S1_NUM_ID5_ORIG = 354 S1_NUM_ID3_ORIG = 361 S1_NAME2_ID5 = 356 S1_NAME2_ID3 = 359 S1_NUM2_ID5_ORIG = 356 S1_NUM2_ID3_ORIG = 359 S1_SQ2 = CAGU S1_SQLEN2 = 4 S1_SQ = ACCAGUAC S1_SQLEN = 8 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 291 S2_NAME_ID3 = 297 S2_NUM_ID5_ORIG = 291 S2_NUM_ID3_ORIG = 297 S2_NAME2_ID5 = 293 S2_NAME2_ID3 = 295 S2_NUM2_ID5_ORIG = 293 S2_NUM2_ID3_ORIG = 295 S2_SQ2 = ACC S2_SQLEN2 = 3 S2_SQ = CGACCGU S2_SQLEN = 7 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 356 H1_OUTID2_ORIG = 295 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 40.313011722253755 H1_P_Y = 128.51318976158535 H1_P_Z = 14.721927520459115 # Orientation: H1_DX_X = 0.12829195927982795 H1_DX_Y = -0.7886322863782311 H1_DX_Z = 0.6013320963211513 H1_DY_X = 0.6062853532028853 H1_DY_Y = 0.5422090515518221 H1_DY_Z = 0.5817451460106309 H1_DZ_X = -0.78483071020176 H1_DZ_Y = 0.2899456178270725 H1_DZ_Z = 0.5476972658568577 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 293 H2_OUTID2_ORIG = 359 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 61.300112019801276 H2_P_Y = 119.33454973164305 H2_P_Z = 1.452039470387498 # Orientation: H2_DX_X = -0.9407879087318136 H2_DX_Y = -0.33899366981651724 H2_DX_Z = 0.0011843176749004591 H2_DY_X = -0.21792768453407518 H2_DY_Y = 0.6021176396149457 H2_DY_Z = -0.7680897554180354 H2_DZ_X = 0.2596644663746659 H2_DZ_Y = -0.7228676503267053 H2_DZ_Z = -0.6403411005187039 ############# END of Description of junction: j4