############# Start of Description of junction: j28 # Number of strands: NUM_STRANDS = 2 LILLEY = 2HS3 FINGERPRINT = 163 LOOP_LENGTH_SUM = 3 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2744 S1_NAME_ID3 = 2752 S1_NUM_ID5_ORIG = 2744 S1_NUM_ID3_ORIG = 2752 S1_NAME2_ID5 = 2746 S1_NAME2_ID3 = 2750 S1_NUM2_ID5_ORIG = 2746 S1_NUM2_ID3_ORIG = 2750 S1_SQ2 = ACGUG S1_SQLEN2 = 5 S1_SQ = GCACGUGCC S1_SQLEN = 9 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 2730 S2_NAME_ID3 = 2735 S2_NUM_ID5_ORIG = 2730 S2_NUM_ID3_ORIG = 2735 S2_NAME2_ID5 = 2732 S2_NAME2_ID3 = 2733 S2_NUM2_ID5_ORIG = 2732 S2_NUM2_ID3_ORIG = 2733 S2_SQ2 = UU S2_SQLEN2 = 2 S2_SQ = GGUUGU S2_SQLEN = 6 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 2746 H1_OUTID2_ORIG = 2733 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 82.1731655504857 H1_P_Y = 187.31357340336677 H1_P_Z = 106.31459721804498 # Orientation: H1_DX_X = 0.467217339383879 H1_DX_Y = -0.4756077011567754 H1_DX_Z = -0.7453222607566659 H1_DY_X = -0.8384609041304714 H1_DY_Y = 0.029117423743457493 H1_DY_Z = -0.5441833219414605 H1_DZ_X = 0.28051964284831854 H1_DZ_Y = 0.8791754604371818 H1_DZ_Z = -0.38517429787216884 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 9 H2_INID2 = 3 H2_OUTID2 = 7 H2_INID2_ORIG = 2732 H2_OUTID2_ORIG = 2750 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 75.35598268789327 H2_P_Y = 175.7923140705112 H2_P_Z = 116.12064028218661 # Orientation: H2_DX_X = 0.928358999457032 H2_DX_Y = -0.34302030296206 H2_DX_Z = 0.14313154747630108 H2_DY_X = 0.10706782462561648 H2_DY_Y = 0.6155654951045051 H2_DY_Z = 0.7807788433139535 H2_DZ_X = -0.35592983726724015 H2_DZ_Y = -0.7095182823525761 H2_DZ_Z = 0.6081922047760742 ############# END of Description of junction: j28