############# Start of Description of junction: j1 # Number of strands: NUM_STRANDS = 3 LILLEY = 2HS2HS4 FINGERPRINT = 61:128:170 LOOP_LENGTH_SUM = 6 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 64 S1_NAME_ID3 = 73 S1_NUM_ID5_ORIG = 64 S1_NUM_ID3_ORIG = 73 S1_NAME2_ID5 = 66 S1_NAME2_ID3 = 71 S1_NUM2_ID5_ORIG = 66 S1_NUM2_ID3_ORIG = 71 S1_SQ2 = GAUAAG S1_SQLEN2 = 6 S1_SQ = GCGAUAAGCC S1_SQLEN = 10 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 50 S2_NAME_ID3 = 55 S2_NUM_ID5_ORIG = 50 S2_NUM_ID3_ORIG = 55 S2_NAME2_ID5 = 52 S2_NAME2_ID3 = 53 S2_NUM2_ID5_ORIG = 52 S2_NUM2_ID3_ORIG = 53 S2_SQ2 = AC S2_SQLEN2 = 2 S2_SQ = GGACGU S2_SQLEN = 6 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 104 S3_NAME_ID3 = 111 S3_NUM_ID5_ORIG = 104 S3_NUM_ID3_ORIG = 111 S3_NAME2_ID5 = 106 S3_NAME2_ID3 = 109 S3_NUM2_ID5_ORIG = 106 S3_NUM2_ID3_ORIG = 109 S3_SQ2 = AUUU S3_SQLEN2 = 4 S3_SQ = GGAUUUCC S3_SQLEN = 8 S3_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 66 H1_OUTID2_ORIG = 53 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 55.02428391493667 H1_P_Y = 155.34101596938035 H1_P_Z = 42.98291261398637 # Orientation: H1_DX_X = 0.18852820209848886 H1_DX_Y = 0.8396924690032961 H1_DX_Z = -0.5092874183726508 H1_DY_X = -0.7084133776780348 H1_DY_Y = -0.24287994803222546 H1_DY_Z = -0.6626913438175208 H1_DZ_X = -0.6801526323850524 H1_DZ_Y = 0.4857220278544503 H1_DZ_Z = 0.5490596582491349 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 10 H2_INID2 = 3 H2_OUTID2 = 8 H2_INID2_ORIG = 106 H2_OUTID2_ORIG = 71 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 48.204974485710906 H2_P_Y = 152.432359280723 H2_P_Z = 21.404093350678703 # Orientation: H2_DX_X = 0.42785938398274226 H2_DX_Y = 0.7779793175803604 H2_DX_Z = -0.4600918701249803 H2_DY_X = 0.21464987702924532 H2_DY_Y = -0.5819357083845773 H2_DY_Z = -0.7843954752535716 H2_DZ_X = -0.8779873449140609 H2_DZ_Y = 0.23685230149635572 H2_DZ_Z = -0.4159798185569059 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 8 H3_INID2 = 3 H3_OUTID2 = 6 H3_INID2_ORIG = 52 H3_OUTID2_ORIG = 109 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 68.50219272321489 H3_P_Y = 147.8822875663524 H3_P_Z = 32.27904981644609 # Orientation: H3_DX_X = 0.6108410250146648 H3_DX_Y = 0.4480190907231929 H3_DX_Z = 0.6528032908208914 H3_DY_X = -0.10319298973728053 H3_DY_Y = -0.7724204146134923 H3_DY_Z = 0.6266720912545907 H3_DZ_X = 0.7849996490624136 H3_DZ_Y = -0.45016174586018565 H3_DZ_Z = -0.4255936483736562 ############# END of Description of junction: j1