#############  Start of Description of junction: j9
# Number of strands:
NUM_STRANDS = 3
LILLEY = HS1HS4HS5
FINGERPRINT = 56:122:173
LOOP_LENGTH_SUM = 10
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  321
S1_NAME_ID3 = 325
S1_NUM_ID5_ORIG =  321
S1_NUM_ID3_ORIG = 325
S1_NAME2_ID5 =  322
S1_NAME2_ID3 = 324
S1_NUM2_ID5_ORIG =  322
S1_NUM2_ID3_ORIG = 324
S1_SQ2 = GCG
S1_SQLEN2 = 3
S1_SQ = AGCGU
S1_SQLEN = 5
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  303
S2_NAME_ID3 = 310
S2_NUM_ID5_ORIG =  303
S2_NUM_ID3_ORIG = 310
S2_NAME2_ID5 =  304
S2_NAME2_ID3 = 309
S2_NUM2_ID5_ORIG =  304
S2_NUM2_ID3_ORIG = 309
S2_SQ2 = GAAGUC
S2_SQLEN2 = 6
S2_SQ = CGAAGUCU
S2_SQLEN = 8
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  340
S3_NAME_ID3 = 348
S3_NUM_ID5_ORIG =  340
S3_NUM_ID3_ORIG = 348
S3_NAME2_ID5 =  341
S3_NAME2_ID3 = 347
S3_NUM2_ID5_ORIG =  341
S3_NUM2_ID3_ORIG = 347
S3_SQ2 = CCCCGUA
S3_SQLEN2 = 7
S3_SQ = ACCCCGUAC
S3_SQLEN = 9
S3_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 8
H1_INID2 = 2
H1_OUTID2 = 7
H1_INID2_ORIG = 322
H1_OUTID2_ORIG = 309
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 4.352955480194725
H1_P_Y = 139.71284435994082
H1_P_Z = 40.19471251300573
# Orientation:
H1_DX_X = -0.741258734483274
H1_DX_Y = 0.5035262689868318
H1_DX_Z = -0.4438431986551876
H1_DY_X = -0.6609058565052082
H1_DY_Y = -0.43205111222462733
H1_DY_Z = 0.613624710440007
H1_DZ_X = 0.11721321337366408
H1_DZ_Y = 0.7481932456696256
H1_DZ_Z = 0.6530451207573265
## Properties of helix 2
H2_INID = 1
H2_OUTID = 5
H2_INID2 = 2
H2_OUTID2 = 4
H2_INID2_ORIG = 341
H2_OUTID2_ORIG = 324
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 6.23052086236435
H2_P_Y = 127.36101785638031
H2_P_Z = 31.700446137318092
# Orientation:
H2_DX_X = -0.22979644008010425
H2_DX_Y = 0.5690044065089097
H2_DX_Z = -0.7895743039764795
H2_DY_X = 0.9716940224801256
H2_DY_Y = 0.08844667193139344
H2_DY_Z = -0.21906143636127595
H2_DZ_X = -0.05481170315648587
H2_DZ_Y = -0.8175641697125116
H2_DZ_Z = -0.5732229109163356
## Properties of helix 3
H3_INID = 1
H3_OUTID = 9
H3_INID2 = 2
H3_OUTID2 = 8
H3_INID2_ORIG = 304
H3_OUTID2_ORIG = 347
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 31.11170121563634
H3_P_Y = 132.62722516494253
H3_P_Z = 21.408187370889404
# Orientation:
H3_DX_X = -0.5957837355789444
H3_DX_Y = -0.7151270799398617
H3_DX_Z = -0.36556121232466054
H3_DY_X = -0.25783547309150023
H3_DY_Y = 0.6013744071113081
H3_DY_Z = -0.7562206630919306
H3_DZ_X = 0.7606330319117625
H3_DZ_Y = -0.35628932345525754
H3_DZ_Z = -0.5426742197271821
#############  END of Description of junction: j9