############# Start of Description of junction: j28 # Number of strands: NUM_STRANDS = 4 LILLEY = 4HS3 FINGERPRINT = 41:43:124:156:159:162 LOOP_LENGTH_SUM = 3 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 927 S1_NAME_ID3 = 930 S1_NUM_ID5_ORIG = 927 S1_NUM_ID3_ORIG = 930 S1_NAME2_ID5 = 928 S1_NAME2_ID3 = 929 S1_NUM2_ID5_ORIG = 928 S1_NUM2_ID3_ORIG = 929 S1_SQ2 = GA S1_SQLEN2 = 2 S1_SQ = UGAC S1_SQLEN = 4 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 913 S2_NAME_ID3 = 916 S2_NUM_ID5_ORIG = 913 S2_NUM_ID3_ORIG = 916 S2_NAME2_ID5 = 914 S2_NAME2_ID3 = 915 S2_NUM2_ID5_ORIG = 914 S2_NUM2_ID3_ORIG = 915 S2_SQ2 = AC S2_SQLEN2 = 2 S2_SQ = AACA S2_SQLEN = 4 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 1040 S3_NAME_ID3 = 1046 S3_NUM_ID5_ORIG = 1040 S3_NUM_ID3_ORIG = 1046 S3_NAME2_ID5 = 1041 S3_NAME2_ID3 = 1045 S3_NUM2_ID5_ORIG = 1041 S3_NUM2_ID3_ORIG = 1045 S3_SQ2 = UUCCG S3_SQLEN2 = 5 S3_SQ = AUUCCGG S3_SQLEN = 7 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 1068 S4_NAME_ID3 = 1071 S4_NUM_ID5_ORIG = 1068 S4_NUM_ID3_ORIG = 1071 S4_NAME2_ID5 = 1069 S4_NAME2_ID3 = 1070 S4_NUM2_ID5_ORIG = 1069 S4_NUM2_ID3_ORIG = 1070 S4_SQ2 = CA S4_SQLEN2 = 2 S4_SQ = CCAG S4_SQLEN = 4 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 4 H1_INID2 = 2 H1_OUTID2 = 3 H1_INID2_ORIG = 928 H1_OUTID2_ORIG = 915 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 55.52996408118392 H1_P_Y = 90.69442425760835 H1_P_Z = 80.9133213569537 # Orientation: H1_DX_X = 0.015069310161443639 H1_DX_Y = -0.8121699952983334 H1_DX_Z = 0.5832262122267622 H1_DY_X = 0.30368143253402735 H1_DY_Y = -0.5520216935606896 H1_DY_Z = -0.7765627066583107 H1_DZ_X = 0.9526544512179314 H1_DZ_Y = 0.1888172359068534 H1_DZ_Z = 0.23832236151723407 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 4 H2_INID2 = 2 H2_OUTID2 = 3 H2_INID2_ORIG = 1041 H2_OUTID2_ORIG = 929 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 43.72652768680061 H2_P_Y = 84.76114209774389 H2_P_Z = 71.65988554236073 # Orientation: H2_DX_X = -0.15791094986192178 H2_DX_Y = -0.042714297580687344 H2_DX_Z = 0.9865290774710616 H2_DY_X = -0.5276159471848487 H2_DY_Y = 0.8481409722139972 H2_DY_Z = -0.04773157789270499 H2_DZ_X = -0.8346769100615816 H2_DZ_Y = -0.5280458124387337 H2_DZ_Z = -0.1564674911154924 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 7 H3_INID2 = 2 H3_OUTID2 = 6 H3_INID2_ORIG = 1069 H3_OUTID2_ORIG = 1045 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 45.64999159299103 H3_P_Y = 89.72666317812472 H3_P_Z = 96.40316787430008 # Orientation: H3_DX_X = 0.2432392080288821 H3_DX_Y = 0.9699318595304192 H3_DX_Z = -0.008177746958992316 H3_DY_X = -0.7357702760172273 H3_DY_Y = 0.18999683877878226 H3_DY_Z = 0.650033308518573 H3_DZ_X = 0.6320417617586784 H3_DZ_Y = -0.15209664401923817 H3_DZ_Z = 0.759861712597143 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 4 H4_INID2 = 2 H4_OUTID2 = 3 H4_INID2_ORIG = 914 H4_OUTID2_ORIG = 1070 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 37.33804252825679 H4_P_Y = 91.4179919398792 H4_P_Z = 90.48714960670503 # Orientation: H4_DX_X = 0.2242299664679237 H4_DX_Y = 0.9566850084343486 H4_DX_Z = -0.18567368358159797 H4_DY_X = 0.48774507417878965 H4_DY_Y = -0.2751147901484785 H4_DY_Z = -0.8285026221176963 H4_DZ_X = -0.8436976145231938 H4_DZ_Y = 0.09521369060448137 H4_DZ_Z = -0.5283073805743612 ############# END of Description of junction: j28