############# Start of Description of junction: j55 # Number of strands: NUM_STRANDS = 4 LILLEY = 2HS2HS2HS3 FINGERPRINT = 13:28:149:155:168:178 LOOP_LENGTH_SUM = 7 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 1843 S1_NAME_ID3 = 1848 S1_NUM_ID5_ORIG = 1843 S1_NUM_ID3_ORIG = 1848 S1_NAME2_ID5 = 1844 S1_NAME2_ID3 = 1847 S1_NUM2_ID5_ORIG = 1844 S1_NUM2_ID3_ORIG = 1847 S1_SQ2 = CAUA S1_SQLEN2 = 4 S1_SQ = ACAUAG S1_SQLEN = 6 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 1827 S2_NAME_ID3 = 1833 S2_NUM_ID5_ORIG = 1827 S2_NUM_ID3_ORIG = 1833 S2_NAME2_ID5 = 1828 S2_NAME2_ID3 = 1832 S2_NUM2_ID5_ORIG = 1828 S2_NUM2_ID3_ORIG = 1832 S2_SQ2 = GACUG S2_SQLEN2 = 5 S2_SQ = GGACUGU S2_SQLEN = 7 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 1883 S3_NAME_ID3 = 1886 S3_NUM_ID5_ORIG = 1883 S3_NUM_ID3_ORIG = 1886 S3_NAME2_ID5 = 1884 S3_NAME2_ID3 = 1885 S3_NUM2_ID5_ORIG = 1884 S3_NUM2_ID3_ORIG = 1885 S3_SQ2 = GA S3_SQLEN2 = 2 S3_SQ = UGAA S3_SQLEN = 4 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 2016 S4_NAME_ID3 = 2021 S4_NUM_ID5_ORIG = 2016 S4_NUM_ID3_ORIG = 2021 S4_NAME2_ID5 = 2017 S4_NAME2_ID3 = 2020 S4_NUM2_ID5_ORIG = 2017 S4_NUM2_ID3_ORIG = 2020 S4_SQ2 = UAAC S4_SQLEN2 = 4 S4_SQ = UUAACC S4_SQLEN = 6 S4_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 2 H1_OUTID2 = 6 H1_INID2_ORIG = 1844 H1_OUTID2_ORIG = 1832 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 96.85991172479417 H1_P_Y = 139.77472262358896 H1_P_Z = 92.63817472824634 # Orientation: H1_DX_X = -0.013124370744051816 H1_DX_Y = 0.2489266012583471 H1_DX_Z = -0.9684334247012316 H1_DY_X = -0.3957367149641584 H1_DY_Y = -0.8907298785758542 H1_DY_Z = -0.2235905540080836 H1_DZ_X = -0.9182702234756164 H1_DZ_Y = 0.38031017682706647 H1_DZ_Z = 0.1101996646084018 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 2 H2_OUTID2 = 5 H2_INID2_ORIG = 1884 H2_OUTID2_ORIG = 1847 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 110.85191191179157 H2_P_Y = 130.49201881908652 H2_P_Z = 79.22385481373554 # Orientation: H2_DX_X = 0.6590023700174754 H2_DX_Y = 0.5662528054746758 H2_DX_Z = 0.4950491254445524 H2_DY_X = 0.1832411785152459 H2_DY_Y = -0.7592260205748289 H2_DY_Z = 0.6244986150332323 H2_DZ_X = 0.7294782702779372 H2_DZ_Y = -0.3208326822101242 H2_DZ_Z = -0.6040925783505031 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 4 H3_INID2 = 2 H3_OUTID2 = 3 H3_INID2_ORIG = 2017 H3_OUTID2_ORIG = 1885 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 113.4336103849549 H3_P_Y = 129.80402008921828 H3_P_Z = 94.4053670093706 # Orientation: H3_DX_X = 0.5073773922051572 H3_DX_Y = 0.8489083730282232 H3_DX_Z = -0.14806335158189654 H3_DY_X = 0.4810880619947113 H3_DY_Y = -0.13649667531780096 H3_DY_Z = 0.8659809087002657 H3_DZ_X = 0.714928289050917 H3_DZ_Y = -0.5106106460207798 H3_DZ_Z = -0.47765501115867437 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 6 H4_INID2 = 2 H4_OUTID2 = 5 H4_INID2_ORIG = 1828 H4_OUTID2_ORIG = 2020 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 104.53979146713505 H4_P_Y = 140.0581380661943 H4_P_Z = 104.85902347261228 # Orientation: H4_DX_X = -0.39085339208097025 H4_DX_Y = 0.4722810333041423 H4_DX_Z = -0.7900533219219881 H4_DY_X = -0.5326213819740104 H4_DY_Y = -0.8160792176739449 H4_DY_Z = -0.2243416455872591 H4_DZ_X = -0.7506984010658897 H4_DZ_Y = 0.333114598992438 H4_DZ_Z = 0.5705143070732106 ############# END of Description of junction: j55