#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = HS6HS12HS12HS16
FINGERPRINT = 9:74:78:79:87:139
LOOP_LENGTH_SUM = 46
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  446
S1_NAME_ID3 = 467
S1_NUM_ID5_ORIG =  446
S1_NUM_ID3_ORIG = 467
S1_NAME2_ID5 =  448
S1_NAME2_ID3 = 465
S1_NUM2_ID5_ORIG =  448
S1_NUM2_ID3_ORIG = 465
S1_SQ2 = GACCGAUAGUGAACAAGU
S1_SQLEN2 = 18
S1_SQ = GAGACCGAUAGUGAACAAGUAG
S1_SQLEN = 22
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  25
S2_NAME_ID3 = 36
S2_NUM_ID5_ORIG =  25
S2_NUM_ID3_ORIG = 36
S2_NAME2_ID5 =  27
S2_NAME2_ID3 = 34
S2_NUM2_ID5_ORIG =  27
S2_NUM2_ID3_ORIG = 34
S2_SQ2 = UGCUCGGC
S2_SQLEN2 = 8
S2_SQ = AUUGCUCGGCUC
S2_SQLEN = 12
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  474
S3_NAME_ID3 = 491
S3_NUM_ID5_ORIG =  474
S3_NUM_ID3_ORIG = 491
S3_NAME2_ID5 =  476
S3_NAME2_ID3 = 489
S3_NUM2_ID5_ORIG =  476
S3_NUM2_ID3_ORIG = 489
S3_SQ2 = AACGCUGCAAAGUA
S3_SQLEN2 = 14
S3_SQ = CGAACGCUGCAAAGUACC
S3_SQLEN = 18
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  501
S4_NAME_ID3 = 518
S4_NUM_ID5_ORIG =  501
S4_NUM_ID3_ORIG = 518
S4_NAME2_ID5 =  503
S4_NAME2_ID3 = 516
S4_NUM2_ID5_ORIG =  503
S4_NUM2_ID3_ORIG = 516
S4_SQ2 = GGCGAAAUAGAGCA
S4_SQLEN2 = 14
S4_SQ = GAGGCGAAAUAGAGCAUG
S4_SQLEN = 18
S4_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 12
H1_INID2 = 3
H1_OUTID2 = 10
H1_INID2_ORIG = 448
H1_OUTID2_ORIG = 34
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 46.17389979309624
H1_P_Y = 126.39864646597239
H1_P_Z = 37.52135074933169
# Orientation:
H1_DX_X = -0.17113646604498456
H1_DX_Y = -0.9375623821806016
H1_DX_Z = 0.3028020632516686
H1_DY_X = -0.5850015341800301
H1_DY_Y = -0.150599183973128
H1_DY_Z = -0.7969272807437591
H1_DZ_X = 0.7927707833899049
H1_DZ_Y = -0.3135229900764358
H1_DZ_Z = -0.522702419830722
## Properties of helix 2
H2_INID = 1
H2_OUTID = 22
H2_INID2 = 3
H2_OUTID2 = 20
H2_INID2_ORIG = 476
H2_OUTID2_ORIG = 465
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 63.90649651453948
H2_P_Y = 143.37142621270678
H2_P_Z = 56.61860159668316
# Orientation:
H2_DX_X = -0.6629803621878452
H2_DX_Y = 0.42092088325910026
H2_DX_Z = 0.619098255036846
H2_DY_X = 0.2298924847464221
H2_DY_Y = -0.6725431890785387
H2_DY_Z = 0.7034451679279385
H2_DZ_X = 0.7124650762040048
H2_DZ_Y = 0.6086963683647468
H2_DZ_Z = 0.34911637934818174
## Properties of helix 3
H3_INID = 1
H3_OUTID = 18
H3_INID2 = 3
H3_OUTID2 = 16
H3_INID2_ORIG = 503
H3_OUTID2_ORIG = 489
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 25.665575590742378
H3_P_Y = 170.65232531812532
H3_P_Z = 66.44962658044784
# Orientation:
H3_DX_X = -0.7191183915454147
H3_DX_Y = 0.6805993467596068
H3_DX_Z = -0.14019011424321093
H3_DY_X = -0.35202221580851045
H3_DY_Y = -0.18286451263949743
H3_DY_Z = 0.9179547535659935
H3_DZ_X = 0.5991236087139207
H3_DZ_Y = 0.709468180546196
H3_DZ_Z = 0.37108732432419345
## Properties of helix 4
H4_INID = 1
H4_OUTID = 18
H4_INID2 = 3
H4_OUTID2 = 16
H4_INID2_ORIG = 27
H4_OUTID2_ORIG = 516
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = 28.135710535201095
H4_P_Y = 140.97503271766735
H4_P_Z = 69.69750674398949
# Orientation:
H4_DX_X = -0.7417219796803032
H4_DX_Y = -0.6571209577068657
H4_DX_Z = -0.13431512126908274
H4_DY_X = 0.6098317438198784
H4_DY_Y = -0.7441031412513439
H4_DY_Z = 0.27279252080927563
H4_DZ_X = -0.2792019861833488
H4_DZ_Y = 0.12042658395174044
H4_DZ_Z = 0.9526508745542515
#############  END of Description of junction: j1