############# Start of Description of junction: j4 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS2 FINGERPRINT = 141 LOOP_LENGTH_SUM = 3 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 354 S1_NAME_ID3 = 361 S1_NUM_ID5_ORIG = 354 S1_NUM_ID3_ORIG = 361 S1_NAME2_ID5 = 356 S1_NAME2_ID3 = 359 S1_NUM2_ID5_ORIG = 356 S1_NUM2_ID3_ORIG = 359 S1_SQ2 = CAGU S1_SQLEN2 = 4 S1_SQ = ACCAGUAC S1_SQLEN = 8 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 291 S2_NAME_ID3 = 297 S2_NUM_ID5_ORIG = 291 S2_NUM_ID3_ORIG = 297 S2_NAME2_ID5 = 293 S2_NAME2_ID3 = 295 S2_NUM2_ID5_ORIG = 293 S2_NUM2_ID3_ORIG = 295 S2_SQ2 = ACC S2_SQLEN2 = 3 S2_SQ = CGACCGU S2_SQLEN = 7 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 356 H1_OUTID2_ORIG = 295 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 40.34783588061543 H1_P_Y = 128.8008945399803 H1_P_Z = 14.41643569583704 # Orientation: H1_DX_X = 0.126505319138154 H1_DX_Y = -0.7875910780306867 H1_DX_Z = 0.6030727137221454 H1_DY_X = 0.6191647170290437 H1_DY_Y = 0.5376788024335895 H1_DY_Z = 0.5723080976186896 H1_DZ_X = -0.7750041660637024 H1_DZ_Y = 0.3010013276051211 H1_DZ_Z = 0.5556678354591558 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 293 H2_OUTID2_ORIG = 359 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 61.54611729050664 H2_P_Y = 119.31611808849536 H2_P_Z = 2.081964167184055 # Orientation: H2_DX_X = -0.9223989709485068 H2_DX_Y = -0.38526719952072597 H2_DX_Z = 0.02737377150845166 H2_DY_X = -0.2430010629026924 H2_DY_Y = 0.5237776056273589 H2_DY_Z = -0.8164603500914378 H2_DZ_X = 0.3002176241017551 H2_DZ_Y = -0.7597540423168141 H2_DZ_Z = -0.576752263421624 ############# END of Description of junction: j4