#############  Start of Description of junction: j5
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS5HS6
FINGERPRINT = 48
LOOP_LENGTH_SUM = 11
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  546
S1_NAME_ID3 = 557
S1_NUM_ID5_ORIG =  546
S1_NUM_ID3_ORIG = 557
S1_NAME2_ID5 =  548
S1_NAME2_ID3 = 555
S1_NUM2_ID5_ORIG =  548
S1_NUM2_ID3_ORIG = 555
S1_SQ2 = UACAAGGU
S1_SQLEN2 = 8
S1_SQ = CAUACAAGGUCC
S1_SQLEN = 12
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  600
S2_NAME_ID3 = 610
S2_NUM_ID5_ORIG =  600
S2_NUM_ID3_ORIG = 610
S2_NAME2_ID5 =  602
S2_NAME2_ID3 = 608
S2_NUM2_ID5_ORIG =  602
S2_NUM2_ID3_ORIG = 608
S2_SQ2 = AAGCCGA
S2_SQLEN2 = 7
S2_SQ = GGAAGCCGAUG
S2_SQLEN = 11
S2_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 11
H1_INID2 = 3
H1_OUTID2 = 9
H1_INID2_ORIG = 548
H1_OUTID2_ORIG = 608
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 10.116885594016349
H1_P_Y = 126.13090246708732
H1_P_Z = 94.69652869547559
# Orientation:
H1_DX_X = 0.5380174689099366
H1_DX_Y = 0.5546020636373612
H1_DX_Z = -0.6347863846656878
H1_DY_X = 0.012799375948459257
H1_DY_Y = 0.7476061604311326
H1_DY_Z = 0.6640189792925497
H1_DZ_X = 0.842836507943904
H1_DZ_Y = -0.3653786801314425
H1_DZ_Z = 0.3951266138623595
## Properties of helix 2
H2_INID = 1
H2_OUTID = 12
H2_INID2 = 3
H2_OUTID2 = 10
H2_INID2_ORIG = 602
H2_OUTID2_ORIG = 555
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = -10.654490904099976
H2_P_Y = 115.77218672016716
H2_P_Z = 91.91253595699807
# Orientation:
H2_DX_X = 0.6907878341060592
H2_DX_Y = 0.5071932612787862
H2_DX_Z = 0.5153320909515031
H2_DY_X = -0.6996678706882715
H2_DY_Y = 0.28907290621262405
H2_DY_Z = 0.6533771694973325
H2_DZ_X = 0.1824199522464749
H2_DZ_Y = -0.8119063065447705
H2_DZ_Z = 0.554554875927721
#############  END of Description of junction: j5