#############  Start of Description of junction: j9
# Number of strands:
NUM_STRANDS = 3
LILLEY = HS1HS4HS5
FINGERPRINT = 60:124:169
LOOP_LENGTH_SUM = 10
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  321
S1_NAME_ID3 = 325
S1_NUM_ID5_ORIG =  321
S1_NUM_ID3_ORIG = 325
S1_NAME2_ID5 =  322
S1_NAME2_ID3 = 324
S1_NUM2_ID5_ORIG =  322
S1_NUM2_ID3_ORIG = 324
S1_SQ2 = GCG
S1_SQLEN2 = 3
S1_SQ = AGCGU
S1_SQLEN = 5
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  303
S2_NAME_ID3 = 310
S2_NUM_ID5_ORIG =  303
S2_NUM_ID3_ORIG = 310
S2_NAME2_ID5 =  304
S2_NAME2_ID3 = 309
S2_NUM2_ID5_ORIG =  304
S2_NUM2_ID3_ORIG = 309
S2_SQ2 = GAAGUC
S2_SQLEN2 = 6
S2_SQ = CGAAGUCU
S2_SQLEN = 8
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  340
S3_NAME_ID3 = 348
S3_NUM_ID5_ORIG =  340
S3_NUM_ID3_ORIG = 348
S3_NAME2_ID5 =  341
S3_NAME2_ID3 = 347
S3_NUM2_ID5_ORIG =  341
S3_NUM2_ID3_ORIG = 347
S3_SQ2 = CCCCGUA
S3_SQLEN2 = 7
S3_SQ = ACCCCGUAC
S3_SQLEN = 9
S3_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 8
H1_INID2 = 2
H1_OUTID2 = 7
H1_INID2_ORIG = 322
H1_OUTID2_ORIG = 309
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 4.054435421806206
H1_P_Y = 140.20298253640345
H1_P_Z = 40.05840502466199
# Orientation:
H1_DX_X = -0.7485374212335376
H1_DX_Y = 0.4792503052687209
H1_DX_Z = -0.4582694337536424
H1_DY_X = -0.6565786913449596
H1_DY_Y = -0.4390582535610861
H1_DY_Z = 0.6132962351520206
H1_DZ_X = 0.09271543067246668
H1_DZ_Y = 0.7599651274102825
H1_DZ_Z = 0.6433170711519125
## Properties of helix 2
H2_INID = 1
H2_OUTID = 5
H2_INID2 = 2
H2_OUTID2 = 4
H2_INID2_ORIG = 341
H2_OUTID2_ORIG = 324
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 5.947818495116505
H2_P_Y = 128.06041361799382
H2_P_Z = 32.446334556923915
# Orientation:
H2_DX_X = -0.21456999679629174
H2_DX_Y = 0.4913281105880287
H2_DX_Z = -0.8441305611224159
H2_DY_X = 0.9717195320943199
H2_DY_Y = 0.020143646260692094
H2_DY_Z = -0.23527725020011303
H2_DZ_X = -0.09859445938408395
H2_DZ_Y = -0.8707415927020747
H2_DZ_Z = -0.4817553438389979
## Properties of helix 3
H3_INID = 1
H3_OUTID = 9
H3_INID2 = 2
H3_OUTID2 = 8
H3_INID2_ORIG = 304
H3_OUTID2_ORIG = 347
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 31.14538110603562
H3_P_Y = 132.72723063005182
H3_P_Z = 21.706257330443734
# Orientation:
H3_DX_X = -0.5979397959505732
H3_DX_Y = -0.7247177658827866
H3_DX_Z = -0.34242102773110616
H3_DY_X = -0.28185388033043424
H3_DY_Y = 0.5900275022958397
H3_DY_Z = -0.7565883535167579
H3_DZ_X = 0.7503508449793728
H3_DZ_Y = -0.35588159034765
H3_DZ_Z = -0.5570654387864771
#############  END of Description of junction: j9