############# Start of Description of junction: j13 # Number of strands: NUM_STRANDS = 7 LILLEY = 2HS2HS3HS3HS2HS2HS6 FINGERPRINT = 31:39:42:43:62:63:63:76:92:102:102:104:119:124:131:131:134:142:144:158:165 LOOP_LENGTH_SUM = 18 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 926 S1_NAME_ID3 = 931 S1_NUM_ID5_ORIG = 926 S1_NUM_ID3_ORIG = 931 S1_NAME2_ID5 = 928 S1_NAME2_ID3 = 929 S1_NUM2_ID5_ORIG = 928 S1_NUM2_ID3_ORIG = 929 S1_SQ2 = GA S1_SQLEN2 = 2 S1_SQ = AUGACC S1_SQLEN = 6 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 910 S2_NAME_ID3 = 917 S2_NUM_ID5_ORIG = 910 S2_NUM_ID3_ORIG = 917 S2_NAME2_ID5 = 912 S2_NAME2_ID3 = 915 S2_NUM2_ID5_ORIG = 912 S2_NUM2_ID3_ORIG = 915 S2_SQ2 = AAAC S2_SQLEN2 = 4 S2_SQ = CGAAACAU S2_SQLEN = 8 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 1039 S3_NAME_ID3 = 1047 S3_NUM_ID5_ORIG = 1039 S3_NUM_ID3_ORIG = 1047 S3_NAME2_ID5 = 1041 S3_NAME2_ID3 = 1045 S3_NUM2_ID5_ORIG = 1041 S3_NUM2_ID3_ORIG = 1045 S3_SQ2 = UUCCG S3_SQLEN2 = 5 S3_SQ = GAUUCCGGU S3_SQLEN = 9 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 1067 S4_NAME_ID3 = 1075 S4_NUM_ID5_ORIG = 1067 S4_NUM_ID3_ORIG = 1075 S4_NAME2_ID5 = 1069 S4_NAME2_ID3 = 1073 S4_NUM2_ID5_ORIG = 1069 S4_NUM2_ID3_ORIG = 1073 S4_SQ2 = CAGGA S4_SQLEN2 = 5 S4_SQ = ACCAGGAGG S4_SQLEN = 9 S4_CHAR = A ## Properties of strand 5 S5_NAME_ID5 = 1084 S5_NAME_ID3 = 1091 S5_NUM_ID5_ORIG = 1084 S5_NUM_ID3_ORIG = 1091 S5_NAME2_ID5 = 1086 S5_NAME2_ID3 = 1089 S5_NUM2_ID5_ORIG = 1086 S5_NUM2_ID3_ORIG = 1089 S5_SQ2 = AGAG S5_SQLEN2 = 4 S5_SQ = CCAGAGAU S5_SQLEN = 8 S5_CHAR = A ## Properties of strand 6 S6_NAME_ID5 = 1265 S6_NAME_ID3 = 1272 S6_NUM_ID5_ORIG = 1265 S6_NUM_ID3_ORIG = 1272 S6_NAME2_ID5 = 1267 S6_NAME2_ID3 = 1270 S6_NUM2_ID5_ORIG = 1267 S6_NUM2_ID3_ORIG = 1270 S6_SQ2 = CCGU S6_SQLEN2 = 4 S6_SQ = GUCCGUAC S6_SQLEN = 8 S6_CHAR = A ## Properties of strand 7 S7_NAME_ID5 = 1284 S7_NAME_ID3 = 1295 S7_NUM_ID5_ORIG = 1284 S7_NUM_ID3_ORIG = 1295 S7_NAME2_ID5 = 1286 S7_NAME2_ID3 = 1293 S7_NUM2_ID5_ORIG = 1286 S7_NUM2_ID3_ORIG = 1293 S7_SQ2 = AAUCGAGU S7_SQLEN2 = 8 S7_SQ = GUAAUCGAGUAG S7_SQLEN = 12 S7_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 928 H1_OUTID2_ORIG = 915 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 58.189559841892425 H1_P_Y = 91.50756855217035 H1_P_Z = 81.65472805761998 # Orientation: H1_DX_X = 0.15970298420882756 H1_DX_Y = -0.9842967789373063 H1_DX_Z = 0.07519845615739484 H1_DY_X = 0.2541889211507353 H1_DY_Y = -0.03260445841002024 H1_DY_Z = -0.9666048529032025 H1_DZ_X = 0.9538778481540575 H1_DZ_Y = 0.17348429400222187 H1_DZ_Z = 0.24499030702362745 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 1041 H2_OUTID2_ORIG = 929 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 41.46940885759632 H2_P_Y = 83.53030627060569 H2_P_Z = 71.4858403362698 # Orientation: H2_DX_X = -0.42679832363140235 H2_DX_Y = 0.42402037508426815 H2_DX_Z = 0.7987802654415219 H2_DY_X = -0.3512004037707257 H2_DY_Y = 0.7362296381811291 H2_DY_Z = -0.5784671090519709 H2_DZ_X = -0.8333675463663752 H2_DZ_Y = -0.5274207441664345 H2_DZ_Z = -0.16530544844684414 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 9 H3_INID2 = 3 H3_OUTID2 = 7 H3_INID2_ORIG = 1069 H3_OUTID2_ORIG = 1045 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 47.255794501217025 H3_P_Y = 89.61805965640163 H3_P_Z = 98.46596007683327 # Orientation: H3_DX_X = -0.19672025034607543 H3_DX_Y = 0.9198371043264899 H3_DX_Z = 0.3394124991924201 H3_DY_X = -0.766940689751543 H3_DY_Y = -0.3600316938747312 H3_DY_Z = 0.5312053819466769 H3_DZ_X = 0.6108216773389756 H3_DZ_Y = -0.1558104005192007 H3_DZ_Z = 0.7762860282027759 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 9 H4_INID2 = 3 H4_OUTID2 = 7 H4_INID2_ORIG = 1086 H4_OUTID2_ORIG = 1073 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 33.07581393882316 H4_P_Y = 101.84125186944395 H4_P_Z = 104.59645249690388 # Orientation: H4_DX_X = -0.9788593098371621 H4_DX_Y = 0.19856459375768054 H4_DX_Z = 0.04905663717522657 H4_DY_X = -0.08465947268852858 H4_DY_Y = -0.6116708191478608 H4_DY_Z = 0.7865695027695097 H4_DZ_X = 0.1861913672252129 H4_DZ_Y = 0.7657877715848116 H4_DZ_Z = 0.6155500496807491 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 8 H5_INID2 = 3 H5_OUTID2 = 6 H5_INID2_ORIG = 1267 H5_OUTID2_ORIG = 1089 H5_INSEQ_CHAR = A H5_OUTSEQ_CHAR = A # Position: H5_P_X = 12.250590867783494 H5_P_Y = 97.22800425414549 H5_P_Z = 94.39843076115373 # Orientation: H5_DX_X = -0.1368863232313462 H5_DX_Y = 0.9388305236579555 H5_DX_Z = -0.31600535179062206 H5_DY_X = -0.9738573318957471 H5_DY_Y = -0.06916250316379546 H5_DY_Z = 0.21637570397112427 H5_DZ_X = 0.18128439432308596 H5_DZ_Y = 0.33736300331280233 H5_DZ_Z = 0.9237543896354055 ## Properties of helix 6 H6_INID = 1 H6_OUTID = 8 H6_INID2 = 3 H6_OUTID2 = 6 H6_INID2_ORIG = 1286 H6_OUTID2_ORIG = 1270 H6_INSEQ_CHAR = A H6_OUTSEQ_CHAR = A # Position: H6_P_X = 10.62010153199077 H6_P_Y = 89.96982667164168 H6_P_Z = 73.02251875868731 # Orientation: H6_DX_X = 0.6844602796958235 H6_DX_Y = -0.6827723100231395 H6_DX_Z = 0.2556092685807272 H6_DY_X = -0.7251986856875483 H6_DY_Y = -0.6736175130405968 H6_DY_Z = 0.14257037701457875 H6_DZ_X = 0.07483977415636112 H6_DZ_Y = -0.28295126575203255 H6_DZ_Z = -0.9562100132364009 ## Properties of helix 7 H7_INID = 1 H7_OUTID = 12 H7_INID2 = 3 H7_OUTID2 = 10 H7_INID2_ORIG = 912 H7_OUTID2_ORIG = 1293 H7_INSEQ_CHAR = A H7_OUTSEQ_CHAR = A # Position: H7_P_X = 31.278746636040683 H7_P_Y = 99.7482251240675 H7_P_Z = 77.84519425976869 # Orientation: H7_DX_X = 0.9628187035131468 H7_DX_Y = -0.21188016138034982 H7_DX_Z = -0.167591591014272 H7_DY_X = -0.26292426277992575 H7_DY_Y = -0.8774609469615626 H7_DY_Z = -0.401164702583543 H7_DZ_X = -0.062056234230681184 H7_DZ_Y = 0.43031277435227366 H7_DZ_Z = -0.9005442465655733 ############# END of Description of junction: j13