#############  Start of Description of junction: j9
# Number of strands:
NUM_STRANDS = 3
LILLEY = HS1HS4HS5
FINGERPRINT = 57:123:173
LOOP_LENGTH_SUM = 10
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  321
S1_NAME_ID3 = 325
S1_NUM_ID5_ORIG =  321
S1_NUM_ID3_ORIG = 325
S1_NAME2_ID5 =  322
S1_NAME2_ID3 = 324
S1_NUM2_ID5_ORIG =  322
S1_NUM2_ID3_ORIG = 324
S1_SQ2 = GCG
S1_SQLEN2 = 3
S1_SQ = AGCGU
S1_SQLEN = 5
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  303
S2_NAME_ID3 = 310
S2_NUM_ID5_ORIG =  303
S2_NUM_ID3_ORIG = 310
S2_NAME2_ID5 =  304
S2_NAME2_ID3 = 309
S2_NUM2_ID5_ORIG =  304
S2_NUM2_ID3_ORIG = 309
S2_SQ2 = GAAGUC
S2_SQLEN2 = 6
S2_SQ = CGAAGUCU
S2_SQLEN = 8
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  340
S3_NAME_ID3 = 348
S3_NUM_ID5_ORIG =  340
S3_NUM_ID3_ORIG = 348
S3_NAME2_ID5 =  341
S3_NAME2_ID3 = 347
S3_NUM2_ID5_ORIG =  341
S3_NUM2_ID3_ORIG = 347
S3_SQ2 = CCCCGUA
S3_SQLEN2 = 7
S3_SQ = ACCCCGUAC
S3_SQLEN = 9
S3_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 8
H1_INID2 = 2
H1_OUTID2 = 7
H1_INID2_ORIG = 322
H1_OUTID2_ORIG = 309
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 4.267617903413274
H1_P_Y = 141.15029145425544
H1_P_Z = 40.10587947274756
# Orientation:
H1_DX_X = -0.7540502722692906
H1_DX_Y = 0.48961403623496835
H1_DX_Z = -0.4378199200725206
H1_DY_X = -0.6449497520395306
H1_DY_Y = -0.425802491773112
H1_DY_Z = 0.6346117359015366
H1_DZ_X = 0.12429000054205908
H1_DZ_Y = 0.760901001130577
H1_DZ_Z = 0.6368529361192614
## Properties of helix 2
H2_INID = 1
H2_OUTID = 5
H2_INID2 = 2
H2_OUTID2 = 4
H2_INID2_ORIG = 341
H2_OUTID2_ORIG = 324
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 5.613089234543879
H2_P_Y = 128.68280404002311
H2_P_Z = 31.97196434137002
# Orientation:
H2_DX_X = -0.2210082422497015
H2_DX_Y = 0.5483248865304517
H2_DX_Z = -0.8065328112786716
H2_DY_X = 0.9717345262869133
H2_DY_Y = 0.05343469572517279
H2_DY_Z = -0.2299494373002524
H2_DZ_X = -0.08299016375235446
H2_DZ_Y = -0.8345565002467765
H2_DZ_Z = -0.5446357320413568
## Properties of helix 3
H3_INID = 1
H3_OUTID = 9
H3_INID2 = 2
H3_OUTID2 = 8
H3_INID2_ORIG = 304
H3_OUTID2_ORIG = 347
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 30.795098511225746
H3_P_Y = 133.9614677063479
H3_P_Z = 21.50701721173131
# Orientation:
H3_DX_X = -0.6094265251298907
H3_DX_Y = -0.7083244303137519
H3_DX_Z = -0.3561963108860233
H3_DY_X = -0.26961787098798595
H3_DY_Y = 0.6076415602323948
H3_DY_Z = -0.7470461417624996
H3_DZ_X = 0.7455907148778138
H3_DZ_Y = -0.3592328432911529
H3_DZ_Z = -0.5612898094469081
#############  END of Description of junction: j9